Citrus x clementina (clementine): CICLE_v10000344mg
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Entry
CICLE_v10000344mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CICLE_v10000344mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10000344mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CICLE_v10000344mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
AAA_16
AAA_22
TIP49
AAA_2
RNA_helicase
AAA_28
AAA_17
Nucleolin_bd
AAA_18
NPHP3_N
nSTAND3
ATPase_2
Parvo_NS1
Bac_DnaA
AAA_33
IstB_IS21
Rad17
Mg_chelatase
AAA_25
AAA_3
NACHT
TsaE
NB-ARC
Vps4_C
Viral_helicase1
AAA_24
Cytidylate_kin2
AAA_7
IPT
Motif
Other DBs
NCBI-GeneID:
18040335
NCBI-ProteinID:
XP_006431431
UniProt:
V4T572
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MGRRTGGGGARFPSGILRRRIESCENKYSTVEDLVDYLRSNYPDYRRTKQQPFARLVQQT
LDSVGKRTSKNPKRVHEAEERLMHLEDEHVKRRRQTDHDLPSTSSSTSSSSEEEDGVSTS
EDAVYGEKVEPEFDLMKSMLRDSYSESKITRRKSEEKNIEFEVTPRKIDLVNAESREVEV
KKEESVKGGMGLGAEELKGKEGPRFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPM
AGILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAP
SIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDESHRLVQPGDQKSKSDASDSKPGYV
LVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIAR
STPGFVGADLAALANKAGNLAMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERLT
ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEF
GVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRA
RTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVM
DRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGADL
AAMMNEAAMAALEDKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSET
FKAA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggggagaagaacaggaggaggcggagccaggttcccctcggggattctacggcgtcgt
attgaatcatgtgagaataagtactcaacggtggaagacctcgttgattatctccggtcg
aattatcctgactatagacgaaccaagcagcagcctttcgctagacttgtgcaacaaacc
ctagactcggttggaaaaaggacgagcaagaatccaaagagagtccatgaggccgaggag
agactgatgcatttggaggatgaacatgttaagagaaggaggcagactgatcacgacctt
ccatccacgtcgtcttctacatcttcttcatcagaagaagaagatggagtgtcgacgtcg
gaagatgcggtgtatggggaaaaggtggagccagagtttgatttgatgaaatcaatgtta
cgggattcatactcggaatcaaaaatcacgagacggaaaagcgaagaaaaaaatattgag
tttgaggttacgccgaggaagattgatttggtcaatgcggaaagtagggaggttgaggtg
aagaaagaagaatcagtgaaaggaggaatgggtttgggggctgaagagttgaaggggaag
gaggggccaagatttcaggacttgggagggatggagagtgtgttggaggagttgaagatg
gaggtgattgtgcctttgtatcatcctcagttgccacagtggctgggagttcgaccaatg
gctgggattttgttgtacgggccaccaggttgtggaaagaccaagttggctcatgccatt
gctaatgagactggtgttcctttctataaaatttctgccactgaagttgtctcgggtgtc
tctggcgcatcggaagaaaatatccgagatcttttttcaaaggcatacaggactgcacca
tcaattgtatttattgacgaaattgatgcgattgcttcaaagagagaaaatctgcagagg
gagatggagagacggattgttactcaattaatgacttgtatggatgaatctcatagactt
gtacaaccaggtgatcaaaaatctaagtcagatgcctctgattcaaaacctggctatgtt
cttgtaattggagccactaatagaccggatgctgttgatcctgcacttagaaggcctgga
cgatttgatcgtgaaattgttctaggtgttccggatgagaatgccagggtacagattctc
tctgtgcttactcgtaatctaagggtagaaggctcttttgatcttgtgaaaatagccagg
tctactccagggtttgttggagctgatttggcagcacttgctaacaaggctggaaacctt
gccatgaagagaatcatagaccaaagaaagtctgagctttccggaaattctatagcagaa
caacatagtgatgactggtggaggcagccatggttgcctgaagaaatggaaaggctgaca
atcactatgactgattttgaggaagccaccaaaatggttcaaccctcatcaagaagagaa
ggattctcggccattcctaatgttaaatgggaagatgttggtgggcttgattacctaagg
cacgaatttgaccgctatatagttaggcgtataaaattcccagaggaatatgaggaattt
ggagtagatttggagactggatttttgctttatgggccaccaggctgtggtaaaacgctt
attgccaaagctgttgctaatgaagctggagccaatttcattcacatcaagggacctgaa
ctcctgaataaatatgttggagaaagtgagctggcagttcgaacattattcagtcgtgca
agaacatgttcaccatgcatacttttctttgatgaggtggatgctctgactacaaagcgt
ggaaaagaaggaggttgggttgttgagcgtcttttgaaccagttactcatagagttagac
ggggcagacaagcggaagggtgtctttgtcatcggtgcaaccaataggcctgatgtgatg
gatcgtgctgtcttaaggcctgggaggtttggtaaactcctctatgtccctcttcccact
ccagatgagcgcgggttgatattggaagctcttgctaggaagaagccaatagatgacagt
gttgatttgcacaccattgcacaatcaaagttttgtgagaatttaagtggagctgatctt
gctgcaatgatgaatgaagctgcaatggctgccttggaagataaactgatatcaagcaag
agctcctcggatgtgactccatttacaatcaagttaactcattttgagcaagcactaagt
aaaatctcaccatctgtctcagaattgcaaatacagaggtacaagaccctgtcagagacc
ttcaaagcagcatga
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