KEGG   Citrus x clementina (clementine): CICLE_v10000367mg
Entry
CICLE_v10000367mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K15361  WD repeat-containing protein 48
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    CICLE_v10000367mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10000367mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     CICLE_v10000367mg
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd RAWUL Beta-prop_DCAF12 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_Nup120_160 WDR90_beta-prop_4th VWA_3_C
Other DBs
NCBI-GeneID: 18042891
NCBI-ProteinID: XP_006433088
UniProt: V4SFA4
LinkDB
Position
Unknown
AA seq 763 aa
MHRVGSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSR
DGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIR
TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGS
GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKV
VRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH
TDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDDNIWVATT
DSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFSRARVSLEGSTPVPVFKEPNFTIPGIPGI
VQHEILNNRRHVLTKDTAGSVKLWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVD
TRLGSLSVHLDTPQCFSAEMYSADLQIAGKPEDDKVNLARETLKGLLAHWLAKRKLRLGS
QATVNGDVLSAKDISARSLTHSRVEVDGNAENDSVVYPPFEFSTISPPSIITEGSQGSPW
RKKITDLDGTEDDKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAP
RILRIHKVVNYVIEKMVFDKPSDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKL
RPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVLNYRVVQGK
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcaccgcgtgggtagtgcgggtaacaatgccaattctactcgcccccgtaaagagaag
aggttgacatatgtgttgaataattctgatgacaccaagcattgtgctggcataaattgt
ttggctgtattgaagtcatctgtatccaatggggttgattacctgttcactggcagtcgt
gatggcacattaaagagatggtcactggctgatgatgttggaagttgttctgcaacattt
gagtcgcatgttgactgggtaaatgacgctgtccttgtaggtgataatactcttgtttcc
tgctcttcagacaccaccctcaagacatggaattgctcatctgatggaacttgtataagg
actctccgtcagcactctgactatgttacttgtctcgctgcagcagaaaaaaatagcaat
attgttgcatctggtggtcttggtgcggaggttttcatatgggatatagaagctgccctt
gctccttcgaaatcaggtgatgccatggaagatgattgttcaactggtatcaatggttct
gggaattcgttaccagtaacaagtctacggaccattggttcaagcaacagcatttcagca
cacacaagtcagtctcaaggatatgtcccaattgctgccaaaggccataaggagtctgtc
tatgcattggccatgaatgatagtggaaaccttctggtttctggtggaactgagaaggtt
gtacgtgtatgggatccaaggactggttcaaaaactattaagcttagagggcatacagat
aatattcgatctctgctcctagattctactggaagatattgcttatcaggatcctccgac
tctatgatcaggttatgggatcttggtcaacaacgatgcattcactcctatgctgtccac
actgattctgtttgggcacttgccagcactccaacatttagtcacgtttacagtggtggg
agagacctttctttatacttgacagacttggcgactagagaaagtctattgctttgcaca
ggggaacacccaattctgcaattggcattgcatgacgataatatatgggtagccacaaca
gattcttcggttcataggtggcctgctgaaggacgcaatcctcaaaaggtctttcagaga
ggtggctcattcatagctggaaatttgtctttttcgagggcaagagtttcgttggaagga
tctacgccagttcccgttttcaaagaaccaaactttaccattcctggaattccgggaatt
gtgcagcatgaaatcttaaataatagaaggcatgttttgactaaggacactgctggttca
gtgaagctatgggagatcacgcgaggtgttgtggttgaggactatggaaaggcttcattt
gaggagaaaaaagaagaactatttgagatggtaagtattcctgcgtggttcacggtggac
actagacttggaagcttgtctgttcatttggacacaccacaatgcttctccgctgagatg
tattcagcggaccttcaaattgctggaaagcctgaggacgataaggttaacttagctcgt
gaaaccctcaaaggtctactggctcattggttagctaagagaaagctgagacttggatca
caagctactgtcaatggggatgttttatcagcaaaggatatcagtgctagaagtcttacc
cattcaagagttgaagtagatggtaatgctgaaaatgactcagtggtgtatcctccattt
gaattctcaacaatttcgccaccatccataattacggagggttctcaaggaagcccatgg
agaaagaaaattacagacttggatggaactgaagatgacaaggactttccttggtggtgt
cttgactgtgtcttgaataatcgtctaccacccagagaaaacaccaagtgcagcttttac
ctgcatccttgtgaaggttcggctgtccagatcctgacacaggggaaactaagtgcacct
cggatattgagaatacacaaggttgttaattatgtcatagagaagatggtttttgataaa
ccatcggatagtgtaaatcctgatggaacattcgctcctccccttggcggaggtccattg
cagagctctgctgttggagatggatctttccgttctggattgaagtcatggcaaaagcta
aggccttctatagagatcttgtgtaataatcaggtcttatctccagatatgagcttggct
actgtgcgtgcttatgtatggaagaaacctgaggacctggttcttaattacagagtggtc
cagggcaagtga

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