Citrus x clementina (clementine): CICLE_v10000539mg
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Entry
CICLE_v10000539mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10000539mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
CICLE_v10000539mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_8
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
18040838
NCBI-ProteinID:
XP_006431963
UniProt:
V4SCB9
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MEAKRKKNSNPFDFLSEEIIFNILDHLNNDPFARKSFSLTCRNFYSIESRHRKILKPLCA
ETLSRTSARYPFITQLDLSLCPRANDDALSIVSSSPWKLTLRSINLSRSRLFTKVGLSSL
AVNCRFLTEIDLSNGTEMGDAAAAAIAEAKNLERLWLARCKLITDLGIGRIAACCRKLKL
LCLKWCIRVTDLGVELVALKCQEIRTLDLSYLPITEKCLPPVVKLQYLEDLVLEGCHGID
DDGLASLEYSCKSLKALNLSKCQNISHVGLSSLIKGADYLQQLILAYSFWVSADLSKCLH
NFPMLQSIKFEDCPVARSGIKAIGNWHGSLKELSLSKCSGVTDEELSFVVQSHKELRKLD
ITCCHKITYASINSITKSCTSLTSLRMECCKLVSWEAFVLIGQQCQYLEELDITENEVND
EGLKSISRCSKLSSLKLGICSNITDEGLTHVGSTCSTLKELDLYRSSGITDVGVVAVSHG
CPSLEMINIAYNERITDTSLISLSECLRLKVLEIRGCPRISAIGLSAIAMGCRQLAMLDI
KKCFNINDNGMIPLAQYSQNLKQINLSYCSVTDVGLIALASINCLQNMTILHVVGLTPNG
LVNALLRCQGLIKVKLNASFRPLLPQSFLHYMEAQNFLFLWRDKAFPGEN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaagagaaagaaaaacagcaacccttttgattttctctcagaagaaatcatt
ttcaacattcttgatcatcttaacaacgacccatttgcgagaaaatcattctccctcact
tgcagaaatttttactctattgagtctcgccatcgcaaaatcctcaagcctttatgcgca
gaaactctctcaagaacctcagctcgatatccttttattacacaactcgatctctctctt
tgcccccgtgcaaatgatgacgcattgagcattgtatcatcatcaccctggaagctaact
ttgcgtagcataaatctttcgagatcaaggttgtttacaaaagtgggactgtcgagtttg
gctgtgaattgccgatttttgaccgagattgacttgtctaatgggacagagatgggtgac
gccgcagctgcggcgattgctgaggctaagaatttggagaggttgtggttggccaggtgt
aagttgattactgatttgggaattggacgcattgctgcttgctgtagaaagctgaagctg
ctttgcttgaagtggtgcattcgcgtaactgatcttggggtggagttggttgctttgaaa
tgtcaggagattagaactttggatctctcttacttacccataacagagaaatgtctccca
cctgtcgtgaaactacaatatctggaagatctagttcttgagggatgccatggtattgat
gatgatggccttgcatcccttgaatacagttgcaaatctctaaaggctctaaacttgtca
aagtgtcagaatataagtcatgtgggtttgtcttctctgataaaaggggctgattaccta
cagcaacttatattagcttacagcttttgggtcagtgcagatctgtcaaaatgtctgcat
aatttcccgatgctgcaatcaattaagtttgaagattgtccagtcgctcgttctgggata
aaagctattggaaattggcatggttctctcaaggagttgagtttaagcaagtgctcagga
gtaacagatgaggaactctcctttgttgttcaatctcataaagaattaaggaagttagat
atcacatgttgtcacaagataacatatgcctctatcaatagcatcacaaaatcgtgcacc
tcactcacttctctcagaatggagtgttgtaaattggtttcatgggaagcctttgtgttg
attggacagcaatgtcaatatttagaggaattggacattacggaaaatgaagtcaatgat
gaaggcctgaagtccatctcaagatgttccaaactttctagtttgaaactaggaatctgc
tcaaatataactgatgagggactcacacatgttggaagtacttgttcaacgcttaaggag
cttgatttgtacaggtcttcagggataactgatgtgggcgttgtggcagtttcccatggt
tgtccttcccttgagatgatcaatatagcctataacgaaagaattacagatacctcctta
atatcattgtcagaatgtttgaggttaaaagttcttgaaattcgaggatgccctcgtatc
tcggcaataggtctatcagccattgccatgggatgtaggcaactagcaatgctggatatc
aagaagtgcttcaatattaatgataacggaatgattccacttgctcaatactcccaaaac
ctgaaacagataaatttatcgtattgttcggtaactgatgtaggcctcatagcactagct
agtatcaattgcttgcagaacatgactatcttacatgtggtgggtttgactccaaatggg
ctggtcaatgctctgttgagatgtcaaggattgattaaagtaaagcttaatgcatccttt
aggcctttacttcctcaatcatttcttcattacatggaagcccaaaactttttgtttctg
tggagagacaaagcctttccaggtgaaaattga
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