Citrus x clementina (clementine): CICLE_v10000542mg
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Entry
CICLE_v10000542mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CICLE_v10000542mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CICLE_v10000542mg
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
18042334
NCBI-ProteinID:
XP_006433780
UniProt:
V4T6E6
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MSASWVQLQIQDHHVVMDNGLLQVTISKPDGHVTRIQGYGIDNMLEVRNKETNRGYWDLV
WSETGSTGTTGTDELIKGSDFRVIVENEEQVEISFTRMWDISLQDKLAPLNIDKRYIMLG
NTSGFYSYAIYEHIGEWPAFNLPQTRMVFKLRKDKFQYMAVSDNRQRHMPLPDDRRPKRC
KELAFPEAVLLVNPMEPEFKGEVDDKYQYSCENRNLKVHGWICSDPAIGFWQITPSNEFR
SGGPLKQNLTSHVGPITLAMFLSAHYGGEDLVLKLKQDEPWKKVLGPVFFYINSFLDLDS
DDPKAWLWEDAKQQTLNESESWPYSFPASEDFPKWNQRGNISGRLQVQDRYVSDDYLTVD
GAYVGLAPPGDAGSWQTECKGYQFWTTTDTDGFFSIGDIRVGDYNLYAFVPGFIGDYRND
VVLTITEDSDIDMGDLVFEPIRDGPTLWEIGIPSRSAAEFYIPDPDPTYVNKLYVNHPDR
FRQYGLWERYSDLYPEGDLVYTVGVSDYKNDWFYAQVPRKKDDNSYEATTWQIKFKLDTV
DQNATYKLRIALATANVAELEVRVNDEKAEPPLFTTGQIGHDNAIARHGIHGLYRLYSMD
VPAANLAAGENTIFLRQATSSSAVAGVIYDYIRFEGPPSSNSNIEKKEI
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttcttgggtgcaattgcaaattcaggatcatcatgtggtgatggataacggc
ttactccaagtcacaatatcaaaaccagatggacatgtcactcgaattcaaggttatggc
atcgataacatgcttgaagttcgtaacaaggagactaatagagggtactgggaccttgtt
tggagtgaaacaggaagtactggaacaacaggaacagacgaattgatcaaagggagtgat
tttagggtcattgtggagaatgaggaacaagtagagatttcattcacaagaatgtgggac
atttccctccaagacaagctcgctcctcttaatatagacaaaagatatataatgcttgga
aacacctccggattctactcctatgcaatctacgagcacataggagaatggcctgctttc
aacctcccacaaaccaggatggttttcaagcttagaaaagacaagtttcagtacatggcg
gtatcggataacagacagcgccacatgccattgccggacgaccgccggccaaaaagatgc
aaagaactggccttcccagaggctgttctactcgtcaatcctatggagcccgagttcaag
ggcgaggtggatgacaagtaccagtactcatgtgagaatagaaatcttaaggttcatggg
tggatatgctctgatcctgcaattgggttctggcaaataactcccagcaatgaatttcga
tcaggtgggccacttaaacagaatctaacatcacatgttggccccatcactcttgcaatg
tttcttagcgctcattatggaggagaggatttggtgctgaagctgaagcaggatgagccg
tggaagaaagttcttggcccggtttttttctatatcaattcttttttggatttggacagc
gatgatccgaaggcctggctatgggaggatgctaaacaacagacgttgaacgaatctgaa
agctggccgtacagtttcccagcttcggaagattttccaaaatggaatcaaaggggtaat
attagtggcagattacaagtccaagacaggtatgttagtgatgactatctaacagtagac
ggcgcttacgttgggttagcacccccaggggatgcaggatcatggcaaacagaatgcaag
ggctatcaattttggacgacaacagatactgatggctttttttcgatcggtgacatccgt
gttggggactacaacctttatgcttttgtacctggtttcatcggagactatcgcaatgat
gttgttttaaccataactgaagatagtgatattgacatgggtgatcttgtatttgagccc
ataagagatggcccaacattgtgggaaattggcatccccagccgatctgctgctgaattc
tacatccctgatcctgatccgacatatgtcaacaagctttatgttaaccacccagacagg
tttaggcaatatggattgtgggaaagatattcggatttgtaccctgaaggggatttagtt
tacaccgtcggcgttagcgactacaaaaacgattggttctacgctcaagttcctaggaag
aaagatgataactcatacgaggcaactacatggcaaattaagttcaaacttgacactgtg
gatcagaatgcaacatataaactgcgaatagctcttgcgactgctaacgttgcagaattg
gaggtccgggtgaatgatgagaaagcagagcctcctctgtttacaactgggcaaattggg
catgacaatgcaattgcaagacatggaattcatggtctctaccggctctacagcatggat
gtcccagcggctaaccttgctgctggggaaaacaccatctttctgagacaagctacaagc
agtagtgctgtagctggggtcatctatgactatattcgcttcgaaggacccccatcttct
aattccaacatagagaaaaaggaaatttag
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