Citrus x clementina (clementine): CICLE_v10000543mg
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Entry
CICLE_v10000543mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CICLE_v10000543mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CICLE_v10000543mg
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
18040135
NCBI-ProteinID:
XP_006433775
UniProt:
V4T6E1
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MSPPAVNLLIQDRHVVLDNGILEVTFSNPGGIVTGIRYNDIDNLLEVLNDELNRGYWDLV
WNTPGSTGTRGIFDVIQGTSFDVIVENEDQVEISFTRTWDSSLEGKLVPLNIDKRFVMLR
GSSGFYTYSIYEHLEEWPGFNLGETRIAFKLRKDKFHYMAIADNRQRYMPLPDDRVPPRG
QPLAYPEAVLLVNPVEPDFKGEVDDKYQYSCDNKDINVHGWICTDPPVGFWHITPSAEFR
TGGPQKQNLTSHVGPTTLSVFVSAHYSGEDLVPKFNAGEAWKKVFGPVFVYCNSAFDGDD
PLSLWDDAKMQMSVETESWPYSFPASDDFPKSDQRGNVSGRLLVQDEYISDDYISASGAY
VGLALPGDAGSWQRECKDYQFWTSADEDGYFSITAVRAGDYNLYAWVPGFIGDYRYDVVV
NITPGFDIDMGDLVYEPPRNGPTLWEIGIPDRSAAEFYVPDPNPKYINKLYLDHPDRFRQ
YGLWERYAELYPDGDLVYTVGSSDYTKDWFFGQVTRKKDNNSYQGTTWQIKFELDNVNQN
STYILRVAIASANLSELQVRINDPSTNRPLFSSGLIGRDNSIARHGIHGLYWLFNVDVPG
ARLVSGDNTIFFIQPRSTSPFQGIMYDYIRFEGPSDTTSKKETSRLLEK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctccagcggtgaatttgcttattcaggatcgccatgtggtgttggataatggc
atactcgaggttacattttccaatcctgggggaatcgtaactggaattcggtacaatgac
atcgacaacttgcttgaagttctaaatgacgaactgaatagagggtactgggaccttgtt
tggaatacgcctggaagtacaggaacaaggggaatatttgatgtgattcaaggaacaagt
tttgacgtaatagtggaaaatgaggaccaagtagaaatctcattcacaaggacgtgggat
tcttccctggagggcaagctcgtgcccttaaatatagacaaaaggttcgtaatgcttcga
ggttcgtcaggattctacacctactccatttacgagcacttggaggaatggcctggtttc
aatctcggagaaaccagaattgctttcaagctcagaaaagacaaatttcattacatggcg
atagcagacaacaggcaacgatacatgccgttgcctgatgaccgtgtgccgccgagaggc
caacccttggcttatcctgaagctgttctccttgtcaatcctgtggagcccgatttcaaa
ggagaagtggatgacaaataccaatactcatgtgacaacaaagatataaatgtccatggt
tggatttgcaccgaccccccggtcggtttctggcacatcacccccagtgctgaatttaga
actggaggacctcaaaaacagaaccttacctcccatgtgggacccaccactctttccgtg
tttgtcagtgcccattattctggagaagacctggtgcccaaattcaatgctggcgaggcg
tggaagaaagtttttggccctgtctttgtctactgtaattctgcatttgatggtgatgac
ccgctttcgctttgggacgacgctaaaatgcagatgagtgtagaaaccgaaagctggcct
tacagcttcccagcttcagatgatttcccaaagtcggaccaacggggtaacgtaagcggt
agactattggttcaagacgagtacattagtgatgactacatatcagcaagtggtgcatac
gtcgggttggccctgccaggagatgcaggttcatggcaaagagaatgcaaggactatcaa
ttctggacgagcgcagatgaagacggttatttttcaattactgctgtacgagccggtgat
tataatctctatgcatgggttcctggttttataggagattacagatatgatgttgtagtt
aacataaccccaggttttgacattgatatgggtgaccttgtttatgagcctcccagaaat
ggaccaacattgtgggaaataggcatccctgatcgttctgctgctgaattttacgttcct
gatcctaaccccaagtacatcaataaactttatctcgatcatcctgacaggtttagacaa
tatggattatgggaaagatatgcagaactatatcctgatggagacttagtttacacagtt
ggatctagtgactacactaaagattggttctttggtcaggttactaggaaaaaagataat
aactcataccaaggaacaacctggcaaatcaaatttgaactcgacaatgtgaatcagaac
agtacctatatattgcgagtggcgattgcgtctgcaaatttatctgaattgcaggttcgg
attaatgatccaagcacaaatcgacccctcttttcaagtggattaattgggagagacaat
tcaattgcgaggcacggaattcatggtctttattggttgtttaatgtggatgtaccaggt
gctcgcctcgtttcaggcgataacacaatattttttatacagcctcggagcacaagtcct
ttccaggggattatgtatgattacattcgttttgaaggtccttcagatacaacatctaag
aaggaaacttctagattattagagaaataa
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