Citrus x clementina (clementine): CICLE_v10000631mg
Help
Entry
CICLE_v10000631mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10000631mg
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10000631mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10000631mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10000631mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CICLE_v10000631mg
Spliceosome [BR:
cic03041
]
Complex C
Other components
EJC/TREX
CICLE_v10000631mg
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CICLE_v10000631mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
18040902
NCBI-ProteinID:
XP_006432406
UniProt:
V4T7Z7
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MEVFRRAILHAGPPENFALQTVQEVIKPQKQTKLAQDENQLLENMLRTLLQELVSSAVQS
GEPIMHYGQSIDDGETSQAQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKD
IFGYIESKQDILGKLELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKDPPDGIPVDFNFYKTFWSLQEYFCNPALTLAPTKWQKFTS
SLMVVLNTFDAQPLSDEVGDANVLEEEAATFNIKYLTSSKLMGLELKDPSFRRHVLVQCL
ILFDYLKAPGKNDKDLPSESMKEEMKSCEERVKKLLEMTPPKGKDFLHSIEHILEREKNW
VWWKRDGCPPFEKQSMEKKAVQDGPKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
TPAITEYWKPLAEDMDPSAGIEAEYHHKNSRVYCWKGLRFSARQDLDGFSRFTDHGIEGV
VPLELLPPHVRSRYEGKANDRSKRAKKEDSKVAPSQAEENQIAASASENDGDGIRADLEA
SATPVETDVTAGTGNISQSGTATPDEHQKQSSDTDMGQEAGQLDADAEADAGMMDGETDA
EVDLEAVG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaagtatttagaagggcaattctacatgccggtcccccggagaatttcgctcttcag
accgtccaagaggtcataaagcctcagaaacaaacaaagttagcgcaagatgagaatcag
ttattggaaaatatgcttcggactttgcttcaggaactagtgtcatctgcagtgcagtcg
ggtgagccgataatgcattatggccaatcaatagatgatggggaaactagccaagctcaa
attccgcgtcttctagacattgtgctgtatctttgtgagaaagaacatgttgagggtggt
atgatatttcagctcctggaagatttgacagaaatgtctacaatgaaaaattgcaaagat
atttttggttatatagaaagtaaacaagacattttaggaaagttagagctgtttgctcgt
ggaaaacttgtgatgttgagaacttgcaatcaacttcttcgtcgtttgtcaaaggcaaat
gatgtagtgttttgcggacgaatcctcatgtttctggctcacttttttccactgtctgag
cgttcagctgtgaacataaagggagtctttaatacgtcaaatgagaccaaatatgaaaaa
gacccacctgatggcattcctgttgatttcaacttctataaaacgttttggagtttacag
gaatacttttgtaaccctgctctgacccttgctccaacaaaatggcagaaattcacatcc
agtttaatggttgtgttgaacacttttgatgctcagcctttgagtgatgaagtgggagat
gcaaatgttttggaggaagaggcagcaactttcaatataaagtatcttaccagcagtaaa
ttaatgggtttagagttgaaagatccgagctttagacgacatgttcttgtgcagtgcctc
atattgtttgattatctaaaggcccctggaaaaaatgacaaagatttgccatctgaaagc
atgaaagaagaaatgaagtcttgtgaagagcgagtaaagaaactgcttgaaatgaccccg
cctaaagggaaggattttcttcatagtattgagcatatattggaacgtgaaaagaattgg
gtgtggtggaaacgtgatggctgtccaccttttgaaaagcaatctatggagaagaaagca
gttcaagatggacctaaaaaacgtaggccaaggtggagacttgggaataaagaactctct
cagttgtggaaatgggcagatcaaaatccgaatgctttgaccgatcctcaacgtgttaga
actcctgccatcactgaatattggaaacctttggctgaagatatggacccatctgcagga
atagaagctgaatatcaccacaaaaacagccgggtttattgctggaaaggtctccgattt
tcagctcgccaggacttggatgggttttctagatttactgaccatggtattgaaggagtt
gtgccactagaacttttgccgcctcatgtccggtccagatacgaaggtaaagcaaatgac
agatccaaacgtgctaaaaaggaagattcaaaggttgctccatctcaagctgaagaaaat
cagattgcagcatctgcgagtgaaaatgatggggacggtatcagagctgatctcgaagca
tcagcaactccagtggaaactgatgttacagctggaactggcaatatttcccaaagtggt
actgcaacaccagatgaacatcagaagcagagttctgacactgatatgggacaagaggct
ggccaattggatgcagacgcagaagcagatgctgggatgatggatggagagacagatgca
gaagttgatttagaagcagttgggtga
DBGET
integrated database retrieval system
