Citrus x clementina (clementine): CICLE_v10000838mg
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Entry
CICLE_v10000838mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cic03016
]
CICLE_v10000838mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CICLE_v10000838mg
Transfer RNA biogenesis [BR:
cic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CICLE_v10000838mg
Prokaryotic type
CICLE_v10000838mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
18042283
NCBI-ProteinID:
XP_006435279
UniProt:
V4V8M2
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MENAETNTEKLPSPSLSPRQEPDPKRLKMSATSTSDDERDLIPAAAGADSTTKRQLCKRR
KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDK
GVSAVGQVVSGRFCIDPPGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLP
VFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASL
NSQVKVDTVVSTCNGDRHNTNLESVESNKTISESVMVENANSESVNETLVESRTSETVQN
ENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFH
NFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVR
NCAPESLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAEN
FKMKHIFSHIARTEQKEGVVALWLHSLNYRNYPDLRFLGNDESADR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgcagaaaccaacaccgaaaaattgccatccccatcactgtcgccacgacaa
gaaccagatcccaaaaggctcaaaatgtccgcaaccagcacctccgacgacgaacgcgac
ctcatccccgccgccgcaggcgccgattctaccactaaaagacagctatgcaagcgccgc
aagatagccatattcttcgcatactgcggcgtcggctaccaaggcatgcaaaagaaccca
ggcgccaaaaccatcgaaggcgatctcgaagaagccctcttccactccggtgccgtctct
gaacgggaccgtggcaaccccaggcgatatgactgggcccgctcggcccgaaccgataag
ggtgtaagcgccgtgggccaggttgtatcgggtcgcttttgtatcgacccgcccggtctt
gttgaaagacttaattctaatctccccactcagattcggatttttggttacaagcgtgtg
acggcgtcgtttaacgccaagaagttttgcgatcagaggaggtatgtgtatcttcttcct
gtatttgctcttgattcatcttctcatagggatagagagagtgttatggctagtttaggg
tctggtaatgaacttgttaagtgtttagagtgttctgaaagaggccgtaaagtaattggt
gttatgggtaagcgtacttatcagttaggccttccgtctaacgatgagaatgcaagtttg
aactctcaagttaaagttgatactgtagtctccacttgcaatggtgataggcataataca
aatctagaatctgtagagagcaataaaacaatttcagaatccgtaatggtggaaaatgca
aattctgagtctgtgaatgaaactctggttgagagtaggacttctgaaactgttcaaaat
gaaaatactgatttgagtttggatctggattctaagaatgattcgaaggttatggctgag
gaaaggagtgtaaatggagaggagaaattgttaaaggggagtggattttgttatggcgag
gaggagaagaagaggttcaatagaatcttgaagcattatgtagggtctcacaactttcat
aacttcaccaccagaacaaaagctgaagacccatcggctcgacgctacatcatatcattt
ggtgctgactctgtagttaatgttgaaggcattgattttcttaagtgtgaggttgtgggg
cagagtttcatgcttcatcagattcgaaagatgatagggcttgctgttgcagtcgtgagg
aattgtgctcctgagtcattgattgaaactgccttgcagaaggatgttaacattaatgta
ccaacggctcctgaggttggcttatacttggatgagtgtatcttcgcatcatacaacaag
aaatggaaagacagtcatgaagagctgtcaatgaaagcctatgaagaagaagcagaaaat
ttcaaaatgaagcacatattctcgcatatcgcccgaacagaacagaaggagggagttgtg
gccctgtggttgcattctttgaattaccggaactatcctgacctacgttttcttggcaat
gatgaatctgctgatcgttaa
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