Citrus x clementina (clementine): CICLE_v10001126mg
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Entry
CICLE_v10001126mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10001126mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
CICLE_v10001126mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR55
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR54
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_LRRK2
Beta-prop_NWD2_C
VPS8_N
Beta-prop_VPS8
PROPPIN
Ge1_WD40
DUF465
Motif
Other DBs
NCBI-GeneID:
18041975
NCBI-ProteinID:
XP_006434744
UniProt:
V4T902
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MELLIASSSVADTGIGCWDLESGAEQLRYKSCASPPHGLACVGQRFLASSQLREQPSASS
GSILYWSWSKPQVEVKSLPAEPIKPIAANSHGTYIAGGGQSGDIYMWEVASGRLLKKWHA
HYRAVTCLVFSEDGSFLISGSEDGCVRIWSLLTVFEECESQRASHLYLHSFTGHTLRITD
IVIGYGGVSATIVSASEDRTCKVWSLLKGRLLRNIVFPSVIDAIALDPAEHVFYAGSRDG
SIYIAALNAESPSTSSYGMHIIGSLSDHSKAVTCLAYSTGDLLISGSEDGMVRVWDPITH
NIVHMFRLAKGPVNNILVVRRPLYLNLGSFSNPHTSSRRHGSQLPPPLDKYVTSADEDVD
KKGVIRLPSLYNAPRDASYISHRTIENHIKELQQQGSSAATEMEVERLKRECNRTLQMVQ
QWKKMYENLHEFCVNELLDGDQVDGSKQNVV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggagttgctaatcgcatcatcgtcagttgccgataccggtatcgggtgctgggaccta
gaatcaggtgccgagcagctccgatacaaatcgtgcgcctcgcctccgcacggactcgct
tgtgtgggccaacgcttcctcgcctcctcgcagcttcgcgaacaaccttccgcctcgtcc
ggttccatcctttactggtcctggtccaagcctcaggtagaagtaaagagcttaccagcg
gagccgattaagccgattgctgctaatagccacggcacctatattgctggtgggggtcaa
tcgggagatatctacatgtgggaggttgcaagtggtagattattaaagaagtggcacgcg
cattatagggccgttacttgcttggttttttcagaagacggttcatttctgatttctggg
tctgaggacggatgtgttagaatttggtcacttctaacggtatttgaggagtgtgaaagc
cagcgggcaagccatctgtatttgcatagttttactgggcacactctgcgtataactgat
attgttattggctatggaggagtcagtgcaactatagtgtcagcttctgaggaccgaact
tgcaaggtgtggagcctattgaagggaagattgttgagaaatattgtattcccttcagta
attgatgcaattgcattggaccccgctgaacatgtcttttatgccggcagtagagatggc
agtatctatattgctgcacttaatgctgaaagtccctctaccagtagttacgggatgcat
atcattggttcattatctgatcacagcaaggctgtgacctgtttggcatatagtacagga
gatttgttgatttctgggtcagaggatggcatggttcgagtttgggatccaataactcat
aatattgttcacatgttcagacttgcaaaaggacctgtgaacaatattcttgttgttaga
cgaccactgtacctcaatttgggatcattttcaaatccgcatacttcctcaaggaggcac
ggttcacagttacctcctccgctggataaatatgtgacttcggcagatgaagatgtggac
aaaaagggtgtcatacgtcttccctctctttacaatgctcctcgagatgcctcatacatt
agtcatcgcacgattgagaatcatataaaagaactccagcaacaaggttcttctgctgca
acagaaatggaggtggaaaggctgaagcgtgagtgtaatcgaacactgcaaatggttcag
cagtggaagaaaatgtacgagaacttgcatgaattctgcgttaatgagcttttggatgga
gatcaagtggatggcagcaaacaaaatgttgtctga
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