Citrus x clementina (clementine): CICLE_v10001148mg
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Entry
CICLE_v10001148mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10001148mg
Spliceosome [BR:
cic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CICLE_v10001148mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
TGF_beta
Motif
Other DBs
NCBI-GeneID:
18041957
NCBI-ProteinID:
XP_006434490
UniProt:
V4TDK0
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINALQF
YTNVQPTIRGRNVYVQFSSHQELTTMEQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQLRPSAVVARSSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPAEQKGRPSQSGYSEAGGMYAPGARAVAFPQMANAAAIAAAFG
GGLPPGITGTNDRCTVLVSNLNSDRIDEDKLFNLFSLYGNIIRIKLLRNKPDHALVQMGD
GFQAELAVHFLKGALLFGKRLEVNFSKHPNITQGADTHEYMNSNLNRFNRNAAKNYRYCC
SPTKMIHLSTLPQDVTEEEIVSHLEEHGTIVNTKLFEMNGKKQALVLFETEEQATEALVC
KHASSLGGSIIRISFSQLQSIRENSQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccgtccaaggttattcacgttcgcaatgtgggacacgagatttctgaaaat
gatttacttcagctattccaaccatttggagtcataactaagcttgtgatgcttcgtgca
aaaaatcaggctcttctccaaatgcaagatgttccttcagccatcaatgctctgcaattt
tacacgaatgtgcagccaaccatcaggggaaggaatgtttatgtccaattttcatcacat
caggaactaacaacaatggaacagaatgctcaaggacgaggtgatgagccgaaccgaatt
ctcttagttacaattcatcacatgctttatcctattactgtggaagtgctgcatcaagtt
ttttctcctcatggatttgtggaaaagatcgtcacattccagaagtcagctggatttcaa
gcacttatccagtatcaattacgtccgagtgctgttgtagctagaagttctcttcagggt
cgtaatatttatgatggttgctgtcagctggacattcaattctcaaaccttgatgagtta
caagtgaactacaataatgagcgatcaagggacttcacaaatccaaatcttcctgcagaa
cagaaaggcagaccctcacaatctgggtacagcgaagcaggaggtatgtacgctcctgga
gcaagggcagttgcatttccacagatggccaatgcagctgcaattgcagccgcctttggc
ggaggtctacctcctggaataacagggacaaatgataggtgtacagtcttagtttccaat
ctcaattctgatagaatagatgaggataagctttttaacttgttctccctctatggaaat
atcataagaatcaaactcctccgcaataaaccagatcatgctcttgttcagatgggcgat
ggcttccaggctgaattggcggtgcactttctgaagggagccttactatttgggaagcga
ttagaggtcaacttctctaagcatcccaatataactcaaggtgctgacacacatgaatac
atgaactcgaaccttaaccgcttcaaccgtaatgccgcaaagaactatcgttactgctgc
tccccaacaaagatgatccacctttccactttaccacaagatgttactgaagaggaaatt
gtgagccacctggaggagcatggcaccattgtgaataccaagctctttgagatgaatggg
aagaagcaggccttggtcctctttgaaaccgaggagcaggccactgaagcccttgtgtgc
aagcatgctagctcacttggcgggtctataatccgaatctccttctcccagttacagtca
ataagggaaaactcgcagtaa
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