Citrus x clementina (clementine): CICLE_v10001485mg
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Entry
CICLE_v10001485mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03030
DNA replication
cic03410
Base excision repair
cic03420
Nucleotide excision repair
cic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CICLE_v10001485mg
03410 Base excision repair
CICLE_v10001485mg
03420 Nucleotide excision repair
CICLE_v10001485mg
03430 Mismatch repair
CICLE_v10001485mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v10001485mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10001485mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10001485mg
DNA replication proteins [BR:
cic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CICLE_v10001485mg
DNA Replication Termination Factors
ELG1-RFC complex
CICLE_v10001485mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CICLE_v10001485mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CICLE_v10001485mg
Check point factors
HRAD17(Rad24)-RFC complex
CICLE_v10001485mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_16
AAA_11
AAA_5
Rep_fac_C
ResIII
AAA_14
AAA_24
AAA_2
AAA_assoc_2
SLFN-g3_helicase
nSTAND3
PhoH
AAA_19
AAA_28
AAA_30
AAA_7
RNA_helicase
Parvo_NS1
AAA_25
DUF815
IstB_IS21
DNAX_ATPase_lid
TIP49
NPHP3_N
NB-ARC
bpMoxR
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
18041718
NCBI-ProteinID:
XP_006434255
UniProt:
V4T7P2
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MRANFGKIHKSGKNKSPNFTQKFSTTQSSPEKSEDEVKRKMAPVLQSSQPWVEKYRPKQV
KDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELN
ASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTME
TYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEGLNLDAEALS
TLSSISHGDLRRAITYLQGAARLFGSSITSKDLISVSGVIPPEVVEGLFAVCRSGDFDLA
NKEVNNIIAEGYPASLLLSQKIYLMSSRLEYANAWLK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgaatttcggaaaaattcacaaaagcgggaaaaacaaaagccctaactttacg
cagaaattctccactacccagtccagtccagaaaaaagcgaggacgaagtaaaaagaaaa
atggcgccagtattgcagagctcacaaccatgggttgaaaaatatcgaccaaagcaagtc
aaagatgtggctcaccaggaagaggtcgtgcgcgtcctcacaaacactctcgagacagcc
aattgcccacacatgttattttacggcccacctggcaccggaaaaaccaccactgccctc
gccatcgcccaccagcttttcgggcctgaactttacaagtccagagtgctagagctgaat
gcaagtgatgaccgtgggattaatgttgttcgtaccaaaattaaaacttttgctgccgtg
gctgtaggctctggtcagcgacgagggggttacccttgtcccccatataagattattatt
ttagatgaagcagattccatgactgaagatgctcagaatgctctgagacgtactatggaa
acttactccaaagtcacaagattcttctttatatgcaattacataagcaggataatagag
cctcttgcttcaagatgtgcaaagttcaggttcaagccactttctgaggaagttatgagt
agccgtgtattgcacatttgtaatgaagaaggactcaatctagatgcagaggctttatca
accttaagttctatatcacatggtgatctccgcagggctattacatacttgcagggagct
gctcgattatttggatcatcaataacttccaaggacctaattagtgtgtctggtgttatc
ccaccggaggtagtggaggggcttttcgcggtgtgcagaagtggtgactttgatttagca
aataaggaagttaacaacatcattgcagagggatatccagcctctctgcttctttctcag
aagatatatctgatgagcagcaggctcgaatatgcaaatgcttggctaaagtag
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