Citrus x clementina (clementine): CICLE_v10001597mg
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Entry
CICLE_v10001597mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03030
DNA replication
cic03410
Base excision repair
cic03420
Nucleotide excision repair
cic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CICLE_v10001597mg
03410 Base excision repair
CICLE_v10001597mg
03420 Nucleotide excision repair
CICLE_v10001597mg
03430 Mismatch repair
CICLE_v10001597mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v10001597mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10001597mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10001597mg
DNA replication proteins [BR:
cic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CICLE_v10001597mg
DNA Replication Termination Factors
ELG1-RFC complex
CICLE_v10001597mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CICLE_v10001597mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CICLE_v10001597mg
Check point factors
HRAD17(Rad24)-RFC complex
CICLE_v10001597mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
AAA_assoc_2
AAA_16
AAA_11
ATPase_2
AAA_14
AAA_5
AAA_30
nSTAND_NTPase5
AAA_24
DNAX_ATPase_lid
DUF815
AAA_7
RuvB_N
ResIII
bpMoxR
AAA_19
AAA_3
nSTAND3
SLFN-g3_helicase
TniB
AAA_35
MCM
AAA_28
Mg_chelatase
TIP49
RNA_helicase
nSTAND6
AAA_18
AAA_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18040255
NCBI-ProteinID:
XP_006434235
UniProt:
V4SID9
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MAEAETVSLMDFDEDENQNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRD
IVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDV
VRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQ
VNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKAL
NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRIQNLSFIIRLVL
FVLLL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcggaaacggtgtcgcttatggacttcgacgaagacgagaaccagaacttg
aaaccaaaagacaacgggaaaaacgtcatcgtttcaggcacgccacccgacattaaagcc
tctccttgggtcgaaaagtaccgacctcagtccctcgctgacgtggccgctcatcgcgac
attgttgataccattgataggttgactagcgagaacagactgccccatcttctgctgtat
ggtcctcccggcacaggcaaaacatctaccattcttgctgttgcacggaagctttatgga
gcacaatatcacaatatgattctggagctgaatgcgtctgatgatagaggaattgacgtt
gtgcggcaacagatccaagattttgctagcactcaaagcttctcatttggtgtaaaggca
tcagtcaagctggtcttgcttgatgaggctgatgccatgacaaaggatgctcagtttgcc
ttgcgtagagtgattgagaaatacacgaagaacactaggtttgcgcttatctgtaatcag
gtcaacaagattattccagcactgcagtctagatgtaccagattccgatttgctcctctt
gaacctgttcatgtgactgagcgtctcaaacatgtaatagaggctgaaggccttgatgta
accgagggtggcttggcagcgcttgtacggctttgcaatggtgatatgagaaaggccttg
aacattttgcagtcaacacatatggcgtctcagcaaattacagaagaagctgtatacttg
tgcactggaaaccctttgcccaaggacattgagcaaatatcttactggcttctgaacgaa
tcatttgcggatagtttcaagcgtattcaaaatctttcgtttattatccgattggtgtta
tttgttttgctgctgtag
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