Citrus x clementina (clementine): CICLE_v10003131mg
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Entry
CICLE_v10003131mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CICLE_v10003131mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CICLE_v10003131mg
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Ortholog
Paralog
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
18041826
NCBI-ProteinID:
XP_006433777
UniProt:
V4T1K8
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MVSGVQLQVQDKHVVMDNGILQVTLSNPEGIVTGIQFQGIDNLLEVRNAEYNRGYWDLVW
SKPGKKATNFTVIVENEEQVEVSFTRLWNSSLEGQVVPLNIDKRFIMLHGSSGFYTYAIF
EHLGEWPAFNIDNIRMAFKLNKDKFHFMSIADNRQRLMPLPDDRLPGRGQVLAYPEAVLL
VNPVEPEFKGEVDDKYLYSCKSQDIRVHGWICADPPVGFWQITPSIESRSAGPLKQYLAS
HVGPTSLALFHSVHYSGADLILRFGHSEPWKKVFGPIFIYLNSLSNEDDPLLLWEDAKQQ
MIFEVQSWPYDFPASKDFPQSDQRGTLHGRLLVEDRYINMDYIAANGAYVGLAPPGNAGS
WQRECKGYQFWARANADGYFYIDHIRTGNYSLYAFVPGFIGDYKYDFNITIIEGSYIDIG
DLVYKPPRNGPTLWEIGIPDRYAAEFYVPDPDPKYINKLYVNHTDRYRQYGLWERYAELY
PNEDLIYIVNQGDYRKDWFFAQVTRKKDNQTYEGTTWQIKFELDNVNESAVYKLRLALAS
AHVSVLQVRINDPSTEPPLFSTGQIGKENTIARHGIYGLYWLFNVDVPGALFVKGNNNTI
YLTQALSGSPFRGVMYDYIRLEGPPLPPCNSSNNT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtctctggtgtgcaactgcaagttcaagataaacatgtggtgatggataatgggata
ctgcaagtgacattatcaaatccagaaggcattgtcactggaatccaatttcaaggcatc
gataacttgctcgaagttcgtaatgctgaatacaatagaggttactgggaccttgtctgg
agtaagccaggaaagaaagccacaaattttacagttatagtagaaaatgaggagcaggtg
gaggtttcattcaccaggctgtggaattcctccctcgaaggccaggtcgttcccttgaac
atcgacaaaaggttcataatgcttcatggttcatcaggtttctacacttatgccattttt
gaacacttgggtgaatggcctgcgttcaacattgacaacattaggatggcattcaagctc
aacaaagacaagtttcacttcatgtctatagcagacaacaggcaaagacttatgccatta
cctgatgatcgattaccaggaagaggtcaagtccttgcctatccagaggcggttttactt
gtcaatcctgtggaaccagagttcaaaggggaggtagatgacaagtacctatactcatgt
aaaagtcaagatataagggtacatgggtggatatgcgccgacccgcctgtagggttctgg
caaatcactccaagtattgaatcccgatcagctggaccgctcaaacagtacttagcatca
cacgtgggacccacttctcttgcgctttttcacagtgttcattattcaggagcggatctg
atactaagatttggacactctgaaccatggaagaaagtttttggccccatctttatttat
cttaactctttgtcgaatgaagatgatcctcttcttctctgggaggatgctaagcagcag
atgatatttgaagttcaaagctggccttatgattttccagcttccaaagattttcctcag
tcagatcaacggggaacactccatggcagattactagttgaagataggtacattaatatg
gattacattgccgcaaatggtgcatatgtgggcttggcacctccaggaaatgctggatcc
tggcaaagggaatgcaagggttaccaattctgggctagagcaaacgcagatggctatttt
tacatagatcatataaggacaggaaactatagtctttatgcattcgttcctggttttatt
ggggattacaaatatgattttaacataaccataattgaagggtcttatattgacataggt
gatcttgtgtataagcctccaagaaatgggcctacactgtgggaaataggaattcctgac
cgctatgctgcagaattctatgtgcctgaccctgatccaaaatatataaataaattatac
gtcaatcacactgacagatataggcagtatggattatgggaaagatatgcagagctatat
cctaatgaagatttgatttacatagttaatcaaggtgactaccgtaaagattggtttttt
gctcaggtcacaaggaaaaaggacaaccaaacatatgaaggaaccacatggcaaataaaa
tttgagcttgacaatgtaaatgagagtgctgtttataaactacgactggccctagcttca
gcacatgtttctgtattgcaggtccggattaatgacccttcaacagaacctcctttattt
tcaactgggcaaattgggaaggagaatacgattgctaggcatggaatttatggactatat
tggttattcaatgtggatgtgcccggtgctttgtttgttaaagggaataataatacaatt
tatttaacacaggcactgagtggcagccctttccgaggggtcatgtatgactatattcgt
ttagaaggtccccctctcccaccttgtaattctagcaacaatacctaa
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