Citrus x clementina (clementine): CICLE_v10003382mg
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Entry
CICLE_v10003382mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cic03016
]
CICLE_v10003382mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CICLE_v10003382mg
Transfer RNA biogenesis [BR:
cic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CICLE_v10003382mg
Prokaryotic type
CICLE_v10003382mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
18043018
NCBI-ProteinID:
XP_006432989
UniProt:
V4V316
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVEH
NETKASDQLNRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSANSDKS
HRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKKRKERGDNPFD
SRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRV
TVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKAS
ANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGDILLFKAREY
YKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWN
HAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETD
HPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTE
SLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKE
EEAVCGNKKKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMA
LKLGLTLPSSCYATMAIRELLKTSTSVSDFTSFSSLL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgtagacgaatccgacgcaggcattctttgtttcatctccaacctccctggc
tttcgtggcatcctcaagcaaaggtattgtgattttattgtcaatgaagttgatactgat
cgaaaagttgttcatttgaccagtttagatgtccctccagaggaggcggcggtggaacat
aatgaaactaaggcatccgatcaactgaatagaagttatgcttctgaaatagaatcattc
agatcactggctggtgattctgatgcgcaatgtttggagactctaataaatcaagtaact
tctgggaaaaacgaagacagtattccgcccatagttctttctgcaaattcggataaatcc
catcgaacagcaatacataatttctttaaggacaacttcaaattccttgtcactgacacc
gttgatggaccagatgcttcatcaaaatgcatacgcgtaagattaaattcaggagggaat
aacaacagcatgggtagaaattcaaagaaacggaaagagagaggtgataacccttttgat
agcagaggttcagaaaattggccagagcagcttggaaaatttctcaggtttcatctgtac
aaggagaacaaggatacacaggaggccttggggttgatcagcaagatgcttggcatcctg
ccaagatcatttggttttgcaggtacaaaggacaagcgctctgtctcgacacaaagggtc
actgttttcaagcaacgtgcgagtaagttagctgctcttaacaaaaggttgattggtatc
cggttgggtgacttctgttatgtcaaggaaggacttcttcttggtcagcttcttggaaat
cgtttcacaatcacattacgaggagttgttgtagattctgaagatgtcatcaaagcatct
gcaaactccttaggaaggaatgggttcatcaactactttggtctgcagcgttttggaagt
ggttctgtgccaacccaccttgttggagccacattactacgaggagagtggaaaagtgct
gtaaagatgattcttgatccaagggaaggagatatccttttatttaaggcacgggaatac
tataaagaaactgatgacattgacgggaccctaaggaaattacctcgccatttggttgct
gaaagggctatattgcagtgcttgaagaaatgtcctgggaactacttgcaggccctaaaa
gctatacctaggactttgagaatgatgtatgtccatagttaccaaagctttttgtggaac
catgcagctagtgcaagagtgcaaaaacatggaactgagcatgttgtcgtgggagacttg
gtattttgtaaaggagatgatactgaaaaggagttgggatgcgtcaatcctgaatttgag
tatgagagttctaatgacgcagatgattctagtcatttagatgaggtgccagaaactgat
catcctgacggaagacataaccttgtcaagactgtaactgcagaagatatcaacagtgga
aaatacactatcgatgatgtcgttcttcctttgcctggttcacgggttatttatccaatg
aatgatgttgctgaagtttatcatcatttggcagagaaggatgggattaacttgacagag
agtttacataatgtcaaggaattttcaataaccagtatgactggaaattatagacgggta
tttcagaagcctatggactttgaatgggagttgctcacttacattgatggtaataaacca
ttagcagagacagatttggacaaaattgccaaagataaacttgcgaacatagtcaaagaa
gaagaagcagtctgtggaaataagaaaaaagatccatctgactgcatgaaacaatcagaa
agcttaagtaaggatataaagctttcaacagagaataatgaagcagcttgtgccaaagaa
gtaaaacagccgcatgttgaatctgtgtgtggcgctgattctcagggaaagcagatggct
ctaaagctgggtcttacccttccatcttcatgttatgccactatggccataagagagctg
ctaaaaacatcgacatctgtaagtgatttcacttccttttcttcgcttttatga
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