Citrus x clementina (clementine): CICLE_v10003567mg
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Entry
CICLE_v10003567mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CICLE_v10003567mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CICLE_v10003567mg
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Paralog
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
18041827
NCBI-ProteinID:
XP_006433778
UniProt:
V4SH52
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSSLLLLLFLVQCLGLSVSAAGVQLHEQNNHVVMDNGILQVSISTPQGFVIGIQYKGIKN
LLNVQNEEDNRGIEATNYKVIMRTKEQVELSFTRMWHPSTNGTIAPVNIDKRFLMLRGSS
GFYSYAIYKRLKGWPGFQLFNNRMVFKPNPDKFHYMIISGNRQREMPLQQDRERGHKLAY
EEAVLLPNGEVDDKYQYSMDAKDIRVHGWISTDSTVGFWQILPSSESRSFGPLKQFLTSH
TGPISINTFHSTHYVGENFGMNFKDGEAWKKIFGPFFVYVNSVPGKGDRQMLWRDANRQF
MNEVKSWPYKFPASKDFARSNKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSW
QTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAWIPGFIGDFKYHAAIRITAGSAKQIGN
LVYKAPRNGPTLWEIGIPDRSAAEFYIPNPNPKYINKLYVKHDRFRQYGLWERYAELHRK
RDLVYEVWANNYRKDWYFAQNTRKKGNKYEGSTWQIQFKLEGVVKKATYKLRVAVAAAHG
AELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNTIYLSQ
PRKLDAFTGIMYDYLRFEGPDPNS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcttcttttgctcttatttctggtccaatgcttgggcctctcagtctcagct
gcgggggtgcaattgcatgaacaaaataatcacgtggtgatggacaatggcatactccag
gtatctatatcaactccacagggattcgtcattggaattcaatacaagggcatcaaaaat
ttactcaatgtccaaaacgaagaagataatagaggaattgaagcaacaaattataaagta
ataatgcgaactaaagaacaagtggagctctcattcaccaggatgtggcatccctctact
aacggcaccatagctccggtgaatatcgataaaaggtttttgatgcttcgaggatcatcg
gggttttactcttatgccatttacaagcgcctgaagggatggcccggtttccagcttttt
aataataggatggtgttcaagcctaatccagacaagtttcactacatgataatatctggc
aatcgccaaagggaaatgcctctacaacaagaccgggaaagaggccataagctggcctat
gaggaggcagttttgcttcctaatggggaggtggatgacaagtatcaatactcaatggac
gcaaaagatattcgggtccacggatggatatccaccgactccaccgtcggattctggcaa
atcctacccagtagtgaatcccgatcatttggacctctcaaacaatttctaacttctcat
acaggccccatcagcatcaatacttttcacagcacgcattacgttggagagaattttgga
atgaattttaaagatggggaagcttggaagaaaatttttggtcccttttttgtttacgtt
aattctgtaccgggtaaaggggaccggcaaatgctatggagggatgccaatagacagttt
atgaacgaagttaaaagctggccgtacaaattcccagcttcaaaagactttgcaagatca
aataaacgaggtagtatcagcggtagattaattgtcaaagacagatatgttagtcgtgcg
ggcatagccgcaaaaggtgcttacgtgggtttggcaaagccaggcagggctggatcttgg
caaacagaatgcaagggttatcagttttggactgttgcaaacgaggggggaaatttctcc
attaaaaatgtgttgattggcaactataatctttatgcatggatccctggtttcattggg
gatttcaaatatcatgctgccattagaataaccgcaggttctgcaaaacagattggcaat
ctcgtatataaggccccgagaaatggacctacattatgggagataggcatccctgatcga
tcagctgcagaattttatattccaaatcctaatccaaagtatatcaacaagttatatgtt
aaacatgacaggtttaggcagtacggactatgggaaagatatgcagaattacatcgcaag
cgagatttggtctatgaagtttgggctaataattacagaaaagattggtattttgcgcaa
aataccaggaagaaaggtaacaaatacgaaggaagcacatggcaaatacaattcaaactg
gagggagtagttaaaaaggcgacatataagttgagagtggcagtggctgccgcacatggc
gctgagttgcaggttcgagtaaactctcgctcggcacgccgtcctttattttcaagcggg
tcggttgggagagaaaacgcaattgcgaggcatggaatccatggggtgtataagctgttc
aatgtcgatgtgccggggaaggtgctaaggaaaggaaacaacaccatttatctttctcag
ccaagaaaattagatgcttttacaggaatcatgtatgactatctccgttttgaagggcct
gatccaaattcataa
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