Citrus x clementina (clementine): CICLE_v10003807mg
Help
Entry
CICLE_v10003807mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CICLE_v10003807mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CICLE_v10003807mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
CarbopepD_reg_2
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
18040972
NCBI-ProteinID:
XP_006433776
UniProt:
V4TBK8
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MISLLYLLVSAQWLVSSLGVQLINQDKHVVMDNGILQVTLSNPQGHVTGIQYNGIENLLE
VNNRESNRGYWDLVWSGDGIKRKKGLLDRIEATNFTVIEQNEEQVELSFTRTWDSSLEGK
VVPLKIDKRFVMRSGPSGFYTYAIFEHLQGWPAISIGNIRMAFKLNKDKLHYMAIADNRK
RFMPLPDDRLSNRSQVLAFPEAVLLVNPIEPQFRGEVDDKYQYSSESKDIRVHGWICRNP
ATGLWQITPSNEFRSAGPVKQYITSHVGPTSLNVLHSTHYAGADLILNIEDGEPWKKVFG
PIFVYLNSLSHGGDFQKLWEDANKQMMTEVQGWPPNFLASKDFPKSDQRGNVSGRIVVHD
RYVNDKSIPAKGAYVGLAPPGDVGSWQIECKSYQFWTSANEDGYFSFNNIRPGNYNLYAF
VPGFIGDYKYDNVIAISPGSQANLDDLVYEPPRDGPTIWEIGIPDRSAAEFFVPDPNPKY
INKLYVNHPDRFRQYGLWERYAELYPDEDLVYSVGVSDYRKDWFFAQVTRKKDNNTYRGT
TWQIKFKIDNLDENGTYKLRLALATANVAQLRVGVNEPSKNPPLFSTGIIGKDNTIARHG
IHGLYYLYNVSVPGSLLLKGNNTIFLTQTESISPFQGIMYDYIRLEGPPT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcttctttatcttttagtttctgcccagtggctggtttcatctcttggggtg
cagttgattaatcaggataaacatgtggtaatggacaatggcatacttcaggtcacacta
tcaaatcctcagggccatgttactggaattcaatataatggaattgaaaacttgcttgaa
gttaataatcgcgaatctaatagaggttactgggatctggtttggagcggtgatggaatt
aaaaggaaaaagggtttattggatagaattgaagcaactaattttacggtgatagaacaa
aatgaagaacaagtagagctgtcgttcacacggacatgggattcctctctggaaggaaag
gtggttcccctgaagattgacaaaaggtttgtaatgcgaagtggtccatcaggcttctac
acatatgctatttttgagcacttacaagggtggcctgctatcagcattggtaatatcagg
atggccttcaagctcaacaaagacaagcttcattatatggcgatagcagacaaccggaaa
agattcatgccattacctgatgaccgtctgagcaacaggagccaagtcctggccttcccg
gaagcagtcttgcttgttaatccaatcgagccccaatttagaggagaggttgatgacaag
tatcaatactcgagtgaaagcaaagatattagagttcacggatggatttgtagaaacccg
gcaacaggattgtggcaaatcacacctagtaatgagttccgatcagctggacctgtaaaa
caatacatcacctcccatgttggccccacttccctcaatgtactgcatagcacccactat
gctggagcagacttaatattaaacatcgaagacggggagccatggaagaaagtttttggt
ccaatttttgtttatcttaattctttgtcccacggaggcgatttccagaagctgtgggag
gatgctaacaaacagatgatgaccgaagttcagggttggccccctaattttctagcttca
aaagactttccaaagtctgatcaacgtggtaacgtcagtggcagaatagtggttcatgat
aggtacgtcaatgataagagcataccagcgaaaggtgcttatgttggcttggcacctcca
ggagatgttggatcttggcaaatagaatgcaagagctaccaattctggacctcagcaaat
gaagatggctatttctcctttaataacatacgaccgggcaactataatctctatgcattt
gttcctggttttattggagattataaatacgacaacgtcattgctatttccccaggttct
caagctaatttggatgatcttgtatatgagccaccgagggatggaccgacaatttgggaa
ataggcatccccgaccgctcagccgcagaattttttgtcccggatcctaatccaaagtac
atcaacaagttatatgtcaatcatcctgacaggtttagacagtacggattgtgggagaga
tatgcagagctatatcctgacgaagatctagtatattcagttggagtcagtgactaccgg
aaagattggttttttgcacaggttaccaggaagaaagataataacacatatcgaggaacc
acatggcaaattaagttcaaaatcgataacttagacgagaatggaacatataaactgcga
ttggcgctggcgactgcaaatgttgctcaattgcgggttggagtgaatgaaccttcaaag
aaccctcctctgttttctactggaataattggaaaggacaacacaattgctagacatgga
atccacgggctctactatctgtacaatgtcagtgtgcctggtagcttgcttctgaaaggg
aacaataccatctttctcacacaaacagaaagcatcagccctttccaaggaatcatgtat
gactatattcgtttggaaggtcctccaacttaa
DBGET
integrated database retrieval system
