Citrus x clementina (clementine): CICLE_v10003963mg
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Entry
CICLE_v10003963mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CICLE_v10003963mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10003963mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10003963mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CICLE_v10003963mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
CICLE_v10003963mg
COMPASS/SET1 complex (yeast)
CICLE_v10003963mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WDR55
KNTC1_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
18041157
NCBI-ProteinID:
XP_006431581
UniProt:
V4T5J8
LinkDB
All DBs
Position
Unknown
AA seq
212 aa
AA seq
DB search
NGWDESLRLLSLHDNKFMHYFKGHHDRVVSLSLCSSKDCFISGRPATAYNDQGRAFAVAF
GGYIRLFDARKYEGPFDIFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLYSFQGTLP
VSHNSTLEASFSQVDCTLCTNFTFLVLEGSGDGSVYAWSARSRKEGCKLDEFSYRASCHN
MGPWKSHVCIGSSELSFWNPDLSKLGAYVGRK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
aatggttgggatgaatctctacggcttctttctttgcacgataacaagttcatgcattac
ttcaaaggtcatcatgacagggttgtttcacttagcctgtgctcctccaaagattgcttt
atctctggaaggcctgctacagcatacaatgatcaagggcgtgcctttgcagttgccttt
ggaggatacataagattgtttgatgctcgcaagtatgagggtcctttcgacatcttctct
gatggtggagatgtatcagatgctaatgaggtaaagctcagcaatgatgggagacttatg
cttctgaccactctggaaggacatattcatgtgctctactcattccaaggcacacttcca
gtttctcacaattccacattggaggcatctttcagccaggtagattgcactctctgtact
aattttactttcttggttttggaaggttctggtgatggtagtgtatatgcttggagtgca
aggagcaggaaagagggttgcaagttggatgagttttcatacagagcctcctgtcataac
atgggcccctggaagtctcatgtttgtatcggatcatctgagctatcattttggaatcct
gatctgtctaaactgggagcttacgttgggaggaagtga
DBGET
integrated database retrieval system
