Citrus x clementina (clementine): CICLE_v10004129mg Help Entry CICLE_v10004129mg CDS       T02982                                  Name (RefSeq) hypothetical protein   KO K16251   DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] Organism cic  Citrus x clementina (clementine) Pathway cic03020   RNA polymerase Brite KEGG Orthology (KO) [BR:cic00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CICLE_v10004129mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cic03021]     CICLE_v10004129mg Enzymes [BR:cic01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CICLE_v10004129mg Transcription machinery [BR:cic03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Pol IV and V specific subunits      CICLE_v10004129mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 Motif Other DBs NCBI-GeneID:  18033339 NCBI-ProteinID:  XP_006420718 UniProt:  V4RIT9 LinkDB All DBs Position Unknown AA seq 1867 aa AA seqDB search MEENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESC GTSEPGKCEGHFGYIELPIPIYHPSHISELKRMLSLLCLKCLKMKSTKLQIKNDGVAQRL LSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSLTRTLLA SEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSIA MLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVSQ DPNSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVNVH NINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTT HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQ LLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSGPR WTALQILQSVLPPGFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSIFFEKGPEEVL EFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVDL QIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKTL VEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEP GTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAATAM SNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERAA YMVKNQLKRVSLKDAAVEFLIEYKKPEIISDDEGLVGHIHLNKILLEDLRISMHDILPKC QETLKSFCKKKKMKKVVQFFKNTSLSISECCSFQQSCADKRSNMPCLMFVLRGASDSYLD KLSGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTAWIRNPSKNRKGELALDVVLEK SVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSASVTM VAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFMPRKCFEKAA EKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLHMVRSSTG IEELDTGCLGEEVDGLEDEFDWSLSPEHNLCSDKPIFEDLVEDQSWLENKQENENWDSEA DCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEKAGSPSRKPSGWGTEASWGES SSDKWENVGSPAAKSFSEWGTEASWGKSFGDKPENVRSPAAKTSSGWGSEASWGKSPGDR QENVGRSASKPLSGWGAKASWGKSSEDKLEEVETTVAKPSSAWGTEASWDKSSEVTLEKV AAPAENPLSGWGTEAQDSGKSSDWSEWKDHANATASWGRNGSEENSGWDTKASWNTKALD KLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDAKGTDDSSW GKQKLTENAKGTDDSSWGKQKHTENESSQPASSNAWDLPDATGGSETEMQVWGQSRKEPF KKNRGWASSSGEWKGKKNRPPRSPGVVNDDSTVNAMYTVTRQRLDMFTSEEQDILSDVEP IMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGAGIDHFKVDKHGSFQD SRCLFVVSTDGSQQDFSYRKCLESFIRGKYPEFVDEFIGKYFRRPRSGGNREPSLPPVPE EKTVDQD NT seq 5604 nt NT seq  +upstreamnt  +downstreamnt atggaagaaaacacatcatcaacaattttggaggggcaaatagttggaatcagatttggt ttggcaactcaaaaggaaatttgtacagcatcaatcagtgattgttctattagtcatgca agtcagcttgcaaatcccttccttggcttgccacttgaattcggtaaatgcgaatcttgt ggtacttctgaacctggtaaatgtgaaggtcattttggatatatcgagttaccaatacca atatatcatcctagccatattagtgagctgaagcgtatgttgagcttattgtgcttgaaa tgcttgaaaatgaagagtaccaagcttcagatcaagaatgatggcgttgctcaaagatta ttgtcttcttgctgtgaggaagcctcacaagtttctattgtagacgtcaagacaacagat ggtgctttttacttggaattaaagcttccatcaaagtttagactgtgtgctggcttttgg aacttcttagaaagatatggtttccgttatggtgacagtctaactagaactctacttgct tccgaggttaaggaaatgctcaaaagaattcctgaggagactagaaaaaagttggctggg aaagggtatttccctcaagatggatatattctggaatatctgcctgtccctccaaactgt ttgtctgtgcctgacatttctgatggtgttagcactatgtcctcggatctctcaatagca atgctgaaaaaagttctaaagcaagttgagattattagaagttccaggtccggaactcca aattttgaatctcaggaagttgaatctaatgatttacagcttgcagttggtcaatatctg gaagttcggggtactgcaaaatcgtcccgtgatgttgatgcacgttttggggttagccag gatcctaattcaacaacaaaagcatggctggaaaagatgaggacattgtttatcagaaaa ggatcgggtttttcttcccgcagtgtgattactggtgatgcatacaaaagggtaaatgaa attggtgtgccatttgaaattgctcaacgtattacgtttgaggagagggtcaatgtgcac aacattaattatttacaagagctggtggataacaagttgtgcttaacctacagtgatggc tcttcctcatattcactgagagagggttctaaggggcacacttttctaagacctggtcaa gtggtacatcggaggatcatggatggggatactgttttcattaataggccgcctactaca cataagcattcactgcaagcactctctgtgtatgttcatgatgatcacactgtcaagata aatcctcttatctgtggccccttaagtgctgattttgatggtgattgtattcacttattc tatcctcagtccctggctgcaaaagcggaggttctggagcttttctctgtggagaagcag ttgcttagctctcataatggcaatctcaatttgcaattggccactgatgcattgttgtct cttaaggtcatgttcaagaagtatttcctggacaaagcatttgcgcagcaattagctatg tttgccttgtcccctttgccacgacctgctttatcgaaggctcactgctctggccctcgt tggactgctttgcagattctacagtctgttttgcctcctgggtttgacagttgcggggac agatacctgatcaagaaaagtgaagttttaaacggtgattttgatagggacactataccg tcagtgattaatgagattgtaacatctattttcttcgagaagggccctgaagaggttcta gaattctttgattctttgcagcctttgcttatggagaatttgtttgctgatggttttagt gttagtttggaggatttctccttgtccaaagctgctctatggaatattcagaaggagatt caagctctttattctttgctttatcatcggatgtctactcaaaatgagctggtggatttg caaattgaaaaccacatccgacatgtgaaaatgctggttgcaaaattcattttaaagtca tctacactgggttatttaatcgactccaagagtgattcagctgtcagcaaggttgtgcag caggctggcttcttaggcctgcagctttcagataggggaaaattttattcaaagaccctg gttgaggatattgcttctcattttgagaggatatatcccatggatctaaattaccctacc gcaaaatatggattaatcaaggggtgtttttttcatggcttagatccatatgaggagatg actcattcaatttctacccgggaagttattgtccgttcgtccaggggattgtctgaacct ggtaccttgtttaagaacttaatggctgttcttcgcgatgttgtgatttgctatgatggc accgttagaaatgtttgtagcaattccataatccaatttgactatgcggtgaatgctagg aagtctcatagtttattccctgctggtgagcctgttggtgtccttgctgcaactgcaatg tcgaaccctgcatataaggctgttcttgattcttctcctagtagcaacaattcatgggag ctgatgaaggaaatactactttgtagagtaagtttcaataatgacccaattgatcgccgt gtaattctatatctgaatgactgtggctgtgggagaaagtactgtcaagaacgtgctgct tacatggttaagaatcagttgaaaagagtcagtcttaaagatgctgctgttgagttcttg attgaatacaagaaacccgaaattatatcagatgatgaaggccttgttggtcatattcat ctcaacaagattttgttggaagatttgcgtatcagcatgcatgacattcttcccaagtgc caagagaccctcaaatctttctgcaagaagaaaaagatgaaaaaagttgtccagtttttt aagaatacaagtttgtctatcagtgaatgttgctcttttcagcaatcctgtgcggataaa cgttccaacatgccatgcttgatgtttgttttgcgaggagcaagtgatagttatttagat aaactttcaggtgttcttgccaatatgatttacccagttctgttggaaacaataatcaaa ggtgaccctcggatttgctcagcaaatattatctggatcagtccggacacaacagcatgg attagaaatcctagcaagaatcggaagggtgaattggccctggacgtggttcttgagaaa tcagtagttaaacaaagtggggacgcctggaggactgtccttgattcttgtcttcccgta tttcatttaattgacaccaggcgttctgtaccctatgcaattaaacaagttcaggaactg ctgggggtttcttgtgcttttgaacaggcagttcagcgcctctcagcttcagtgactatg gtggcaaaaggtgttcttaaagaacatcttattctattggcaaacagtatgacatgtgct ggtgatttagttggcttcaactctggtggttacaaagcactatcccgttcgttgaatgtc caagtaccattcacagaagcaacattgtttatgcctcggaaatgttttgagaaagctgct gagaaacgtcatactgataacttatcaagtgtggtagctgcttgctcctggggtaaacac gtggctgttggtacaggatcaagatttgacctcctatggcaaacagagaatgaggaattt aatcaggatgacggggtagatgtatatgacttccttcacatggtgagaagtagtactggc attgaagaattggatactggttgtctcggtgaagaagttgatgggttagaagatgagttt gattggagcctgtccccagagcataacttatgttctgacaagccaatcttcgaggacctt gtggaagaccagagttggttagaaaataagcaagaaaatgaaaattgggattctgaggct gattgcaggaaaagctctgaagataaatgggaaaaattggggacttctcttgaaaagcca tcatcaggatggaggacagaaggtgcatgggggaaaagcagtgatgataaattggaaaag gcgggtagtcccagtagaaagccttctggatgggggacagaagcttcctggggggaaagc tccagtgataaatgggaaaatgtgggtagtcctgcagcaaagtctttttcagaatggggg actgaagcttcttgggggaagagctttggggataaaccggaaaatgtgaggagtcctgct gccaaaacttcttcaggatggggctcagaagcttcttgggggaaaagccccggagataga caggaaaatgtggggaggtctgcttcaaagcctttgtcaggatggggggcaaaagcttct tggggaaaaagttctgaagataaattggaagaggttgagactactgttgcaaagccatca tcagcatgggggactgaggcttcttgggataaaagctctgaagttacattggaaaaagtg gcagctcctgctgaaaacccattgtcaggttgggggactgaagctcaagatagtggcaaa tccagtgactggagtgagtggaaggaccatgccaatgctactgcttcttgggggagaaat ggatcagaagaaaattccggatgggataccaaggcttcgtggaatacaaaggctctagat aaacttgacgatgttggatctgctgtggaaaattcatcttcagtttggggtgctcgagaa gacttttcaacaaaaggttgggaggattcatctaaaccaagtgctaatgaaaagtccatt gttcatcaaataggtggttggaatgtgccagatgccaaaggtacggatgatagttcctgg ggaaaacagaaactcactgagaatgccaaaggtacggatgatagttcctgggggaaacag aaacacactgagaatgagtcttcccagccagcaagttcaaatgcttgggatctgccagat gcaacaggtggcagtgaaactgagatgcaagtgtggggacagtcaaggaaagaacctttc aaaaaaaaccgtggttgggcttcaagttcaggggaatggaaaggcaagaagaatcgtcct cctaggtcacctggggtggtcaatgatgattctactgtgaatgcgatgtacacagtgacc cgacagcggttagacatgttcacttctgaagaacaagatattctctcagacgttgaacca attatgcggtctatcaggagaataatgcatcagtctgggtacaatgatggggatcgattg tcagctgatgataaatcattcatatttgataatgtttttaattaccatccagataaagca atgaaaatgggtgctggcatcgatcatttcaaggtcgacaagcacggcagtttccaagat agcagatgcttgtttgttgtctcgactgatggcagccaacaagacttctcctaccggaaa tgcctagaaagcttcattagaggaaagtatcccgaatttgttgatgaattcattggaaag tatttcagaagacctcgttctggagggaaccgggaaccaagtcttcctccagttccggaa gaaaaaaccgtggaccaagattag

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