Citrus x clementina (clementine): CICLE_v10004131mg
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Entry
CICLE_v10004131mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11797
PH-interacting protein
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10004131mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CICLE_v10004131mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
WDR55
Bromodomain
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_HPS5
Beta-prop_EIPR1
VPS8_N
Beta-prop_WDR35_TULP_N
Auxin_resp
WDR90_beta-prop_4th
WD_LRWD1
Agenet
Motif
Other DBs
NCBI-GeneID:
18031496
NCBI-ProteinID:
XP_006419405
UniProt:
V4S1S3
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
MALRKYIPSADAPSGTMKPLNFSSKVHENAQLAGSDTSQPAELDVDVDLREVYFLIMHFL
STGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPH
IEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLLSYDRDKGQNEIDH
PPAHMRWPHMYADQIRGLGLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVR
GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV
ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR
YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARDDS
DQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSR
DGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWS
LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV
WDIWEGIPIRIYEISRFRLVDGKFSPDGASIILSDDVGQLYILNTGQGESQKDAKYDQFF
LGDYRPLVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPYQTMYQQRRLGALGIE
WRPSSLKLAVGPDFSLDQGYQLQPLADLDVMIDPLPEFIDVMDWEPENEVQSDDNDSEYN
VAEEYSTEEKGSLSSTSSGDSECSAEDSEDGENPMDGLRRSKRKKQKAEAEIMTSSGRRV
KRRILDESEGNAAFGNKRTRKSGNRQKSSRRKSSTSKSLRPQRAAARNARSFFSKITGAS
TDGEDVDGSEGELSESESDLQDSYIESEESGRSLLNEQRKHSKGKGISLDDSEDVTKLDT
PESHVNAGIRRLVLKLPVRDSNKHELQERMSDKCNQLVSVIGTSSEAHQEATEGNGNRVS
YVGNNCSSVDANCGLMERRGRGQQFDKLEDYLNLSNGYKDGKIRWGGVRARSSKRLKIGE
MMPLDANNGSGIHLDDDKEKESEVNRHVKPEKDGIDISCGEEITNCGDNTDEVPLKNVKN
LSGENNDVYCGDASCKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHLQNGTNQPSELKE
ILTPVSTKLRIRSKRILRDADVENQNNGCDALHSSSLDIKPNSLPEVLESDGTNRTSSDR
GADGSQRLDAQIDSTSTSHDPLGSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGGVGESTL
NANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMYSGHNRSTSRCQ
LPHEEWGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRRKTHQSSRKGSWLMLSTHEEGSRY
IPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSC
CKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNE
SDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWELFDSDTQWEQPR
IDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLKQVSQKTNFTNRFPVPLSLDVIQSRLEN
NYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDSVTRTLSSLKAPQFHDIGQ
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcgcaagtacattccttctgctgatgcaccttctggaacaatgaaaccttta
aatttttctagtaaggtgcatgagaatgctcagcttgcaggttctgacacaagccaacct
gcggaacttgacgtggatgtcgacctcagagaagtttattttttgattatgcatttcctt
tcgactgggccatgtcatagaacttatggacagttttggaacgaacttcttgaacatcag
cttctacctcgaagatatcatgcttggtattcaaggagtgggttgcctagcggggatgaa
aatgatgacggcatgtcattcccattaagttacaataagttggtggaaaggtatcctcac
attgaaaaagatcatttggtaaagctattaaagcagttgataataaatacctcctctcca
tcacgagccatgattggtggagatgcccctaatgcagctgatgttcctacgcttctggga
aggggatcgttttcacttctgagctatgatagggataaaggacagaatgaaattgatcac
ccccctgctcacatgcgttggccccatatgtatgctgatcagattcgtgggcttggtttg
agggaaattgggggtggtttcacaaggcatcatcgtgcaccatctattcgtgctgcttgt
tatgccattgcaaaaccatcaaccatggtgcagaagatgcaaaatataaagagggtacgg
ggccaccggaatgccgtctattgtgcaatttttgatcgctcgggcagatatgttattact
ggttcagatgatcgccttgtaaaaatatggtctatggagactgcatattgcctggccagc
tgtcgtggacatgaaggtgacattacggatttggctgtgagttccaacaatgcgttggtg
gcatccgcttcaaatgactgtattattcgtgtttggcgtttgccggatgggctaccgatc
tcagtgctgcgtggtcatactgcggctgttactgccattgcttttagtcccaggccaggc
tccgtataccagcttttatcgtcatctgatgatggaacatgtaggatatgggatgctaga
tattcccaatttagtccacgaatatacataccaaggccatcagatgcagtggctgggagg
aacatggctccatcctcaagtgctggtccacaaagccatcaaattttctgttgtgcattt
aatgctaatgggactgtctttgttactggtagctcggacactcttgctagggatgattca
gaccaaccaaatcatgagatagatgtgctctctgggcatgagaatgatgtcaattatgtc
caattcagtggttgtgctgtggcatcaagattttctttggctgacagctcaaaggaagac
agtactcccaagttcaaaaattcctggttttgtcatgacaacatagttacctgttctcgc
gatggcagtgcaattatttggattccgagatcacgtagatcacatccaaaagctgcccgc
tggacgcaagcttatcatctcaaagttcctcctcctcctatgcctcctcaacctccacga
ggggggcctcgtcagagaattcttccaactcctcgtggtgtaaatatgattgtgtggagc
ctagacaaccgctttgttcttgctgctatcatggattgccgaatctgtgtttggaatgct
gcagatggtagcttagtacattctttgactggtcatactgaatctacgtatgttttggat
gttcatcctttcaacccccggatagctatgagtgctggctatgatggaaaaactatagtg
tgggatatttgggaaggcatcccaatcaggatatatgaaatttcccgtttcaggttggtc
gacggcaagttttcaccggatggagcttccattatactttcagacgatgttggtcaatta
tatatattaaacacaggccaaggggagtctcaaaaggatgccaaatacgatcagtttttc
cttggtgattatcgtccccttgttcaagatacctatggaaatgtacttgatcaggaaact
caacttgctcctcaccggcggaatctgcaggatcctctttgtgactcagccatgattcca
tacccggaaccctatcagaccatgtaccagcaaagacggttgggagctctgggtattgag
tggcgtccttcttcactaaaacttgcagtggggccagacttcagtctagaccagggttac
caattgcagccgttggctgacttggatgtaatgattgatccactgccggaatttattgat
gtaatggattgggaaccagagaatgaagtgcaaagtgatgataatgattcagagtacaat
gttgctgaagagtattctactgaggagaaaggaagtttaagttccacttcctctggtgat
tcagaatgtagtgctgaagacagtgaggatggggaaaatcctatggatggtcttcgtaga
tcaaaaaggaaaaaacaaaaggctgaagctgagatcatgacttcgtctgggaggcgtgtt
aaaaggaggattttggatgaatctgagggtaatgctgcattcggaaataaacgaactagg
aaatcaggaaatagacaaaaatcttcaaggaggaagtcttccacatccaagtcattgaga
cctcaaagagctgctgcacgcaatgcccgctcgttcttttctaaaattacaggagcgtct
acagatggagaagatgtggatggttcagaaggtgaattatcagagagtgaaagtgatctg
caagactcatatattgagagtgaggaatctggtagatctttgttaaatgagcaaaggaag
cattcaaaggggaaaggaatttctttggatgattcagaggatgtgactaaacttgatacc
cctgaatctcatgtgaatgctggaatcaggagattggttctaaaattgccggttcgtgat
tcaaataagcatgagctgcaggagagaatgtcagataaatgtaaccagcttgtcagtgta
ataggcacatcatctgaggctcatcaggaagcaactgaaggcaatggtaatcgcgtaagc
tatgttggcaacaactgcagttctgttgatgcaaactgcggcctgatggaaagaagaggg
agagggcaacaatttgacaagcttgaagattatttaaacctgtccaatggatacaaagat
ggaaaaattagatggggaggagtcagagctcgctcttcaaaacgtttgaaaataggagaa
atgatgccattggatgcaaataatggatccggcatacatcttgatgatgataaagagaaa
gaaagtgaagttaacagacatgtaaaacctgaaaaagatggaattgacatatcttgtggg
gaagaaataacaaactgtggggacaatacagatgaagtgcctttaaagaatgtgaaaaat
cttagtggtgagaacaatgatgtatattgcggtgatgctagttgcaaagagcagcaatca
ggcttcagcgagttaaactattatgatgaatcaaaatgtgtgaacacaactgatgaggac
acaactccttatcccaatcaccttcagaatgggactaaccagccttctgaactgaaagag
atcctcacaccagtctcaaccaaactgagaattagatcgaagaggattttaagggatgct
gatgtagaaaatcaaaacaatggatgcgatgcattgcacagcagctctttggacattaaa
cccaattcacttccagaagtgctggagtccgatggaacaaataggactagttcagaccgt
ggggctgatggatctcagcgattggatgctcagattgattccacttctacttcgcatgac
cctttggggtcacattcacattcaagaaagatgtttaatgttgtctatagaaggtcaaag
acaaatagggataggactaattcagaaggtgatggtggtggtgtaggcgaaagcacttta
aatgctaacaacaataatttccatgaaagtgcaactgatggttctcgtaggacacggtcc
atgggtctgaagacaactacatgtgacccagataacgtcagctctaatctgaggttggaa
caacataatcaaccagaagatatgtatagtggccataatagatctacaagcagatgtcaa
cttccacatgaagaatggggatcaagttcaaagatgacagttggattgaggtccacaaga
aaccgaagaaccagttatttattctgtgactcaagtcctatagataggcggaagacacat
caatcatcgagaaaaggatcatggttaatgttgtcaacacatgaggaaggttcccgttat
attccccagttaggggatgaagttgtatatttaagacaggggcatcaagagtatataaat
tatagcggctcaagagaagtgggcccttggataacagtaaagggaaacataagagcagtt
gaattttgtaaagtcgaaagccttgaatatgccactgcttcagggtctggagatagctgt
tgcaaaatgacactcaaatttatagaccctacttccagtgtgtccaatatgacattcaga
cttactttgcctgaagtgactggtttcccagacttccttgttgaaagaactcggtttgat
gctgctattcagagaaattggacatgcagggataagtgcaaagtctggtggaaaaatgag
agtgatgaagatggtagttggtgggacggccgagttctgtctgtcaagcccaaatcttct
gaatttccagacagtccttgggaaaggtataccgtccagtacaagactgagcccacagaa
acacatctacacagtccttgggagcttttcgattctgatactcagtgggagcaacctcgt
attgacgatgataacagaaataagctgttgtctgcctttgccaaattagagcagtctgcc
aatagagtccaggatcaatatggagttcaaaaattgaagcaagtctcacagaagaccaac
tttacgaacaggtttcctgttccattatctcttgacgtgatccagtcaaggttagagaac
aactattatagaggtttggaagcagtgaagcatgacattgctgttatgctctccaatgca
gaatcttactttgggaggaacactgacctttcaacgaaaataaaacgcctttctgactcg
gtcacacggacgttatcatctttaaaagccccacagtttcatgacattggccaatga
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integrated database retrieval system