Citrus x clementina (clementine): CICLE_v10004208mg
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Entry
CICLE_v10004208mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CICLE_v10004208mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cic01007
]
CICLE_v10004208mg
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cic03016
]
CICLE_v10004208mg
Enzymes [BR:
cic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
CICLE_v10004208mg
Amino acid related enzymes [BR:
cic01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CICLE_v10004208mg
Transfer RNA biogenesis [BR:
cic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CICLE_v10004208mg
Prokaryotic type
CICLE_v10004208mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
18031451
NCBI-ProteinID:
XP_006422221
UniProt:
V4SEN9
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MLSSFRTRTRILLLSPLLHSAAASVSDAIVSLAAISSRSPYASSSSLSSIMTEPEKKIET
AEDLERKKKKEEKAKEKELKKLKALEKAEQAKLKAQQKQEQGGNSLKKSVKKNVKRDDGE
DNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIV
LPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRER
KLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFV
RLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAY
PLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILV
DPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAV
NEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKK
LELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVAR
DEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLE
TGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGI
SLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDI
QRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASS
LNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLR
LLHPFMPFVTEELWQRLPQPKGCTTKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCI
RSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKVLLSGTDEAPTD
CAFQNVNENLKVYLKVEVDIEAEREKIRTKLTETQKQREKLEKIINAPGYQEKVPSRIQE
DNAAKLAKLLQEIDFFENESNRLGNSN
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgtcgtttcgcactcgcacacgaatcttactcttgtcgcctcttttacattca
gctgctgcatcagtctccgacgccatcgtctctttggcagcaatctcttcgcgttctccc
tacgcatcatcgtcatcgttatcatcaatcatgacagagcctgagaagaagattgaaacc
gctgaagacctcgagcgaaagaagaaaaaggaggaaaaggctaaggagaaggaactgaag
aaactgaaggcgttagagaaagcagagcaagcgaaacttaaggcgcaacagaagcaagag
cagggagggaacagtttgaagaaaagtgtaaagaagaatgtgaagagagatgacggcgaa
gataatgccgaggagtttgttgatccagagacgcccttgggtgagaaaaagaggatgtct
aagcaaatggccaaggagtataatccaagctctgttgagaagtcgtggtattcgtggtgg
gagaactctggatatttcattgcagataacaagagctcgaagccatcctttgtgattgtt
ctacccccaccaaatgtgactggtgccctacatataggacatgccctcacaacagccata
caggatacaattatacgttggaggagaatgtctggatataatgccttgtgggtacctggc
atggaccatgctgggattgcaacacaggtggttgtagagaagaagctaatgcgtgaaagg
aaattaactaggcatgacattggccgtgagcaatttgtatctgaggtttggaagtggaag
gatgagtatgggggtaccatattaagacagcaacgtcggttaggtgcttctcttgactgg
tcccgtgagtgctttacgatggatgaaaaaaggtcaaaggccgtgacagaggcatttgtt
cggctatacaaggagggtctcatatatagggatcttcggctagtaaactgggattgtgtc
ttacggacagctatatctgatattgaagtggattacgttgacatcccaaagagggagatg
agaaacgttcctggttatgaaaaacaagtggaatttggtgttttaacatcatttgcatat
cctctggagggaggacttggtgagattgttgttgccactactagggtggaaacaatgctt
ggtgacactgccattgctatacatcctgaagatgcaaggtacagtcatctgcatggaaaa
tttgccattcatccatttaatggaagaaaaattcctataatttgtgatgcaattctggtt
gacccgaagtttgggactggagctgttaagataactccagcccatgatccaaatgatttt
gatgttggcaagcgacataatcttgaatttataaacatttttactgatgatgggaaaata
aatagtaatggaggtctggagtttgagggcatgccacgttttaaggctcgtgaggctgtg
aatgaagcattaaagaaaaagggactgtatagaggtgccaaagacaatgagatgcgcctt
ggcctttgttcaagaagcaatgatgttgtggagccaatgataaagccccagtggtatgtt
aactgcaatagcatggcaatggaggctctttatgcagttatggatgatgataaaaagaag
cttgagctcatcccgagacaatatactgctgagtggagaagatggcttgaggccattcgc
gactggtgtgtctcacgtcagctctggtggggtcaccaaattcctgcgtggtatgttact
ttagaagatgatgaattgaaggaacttggatcatacaatgaccactggatagttgcaaga
gatgagaaggaggcactagctgtggccaataaaaaattttctgggaagaaatttgaaatg
tgtcaagatcctgatgtgcttgacacgtggttttcttctggtctctttccattatcagtt
ttgggttggccagatgatacagatgatttgaaggcattttatccaacttctgtccttgaa
actgggcatgacattctctttttctgggtcgctcggatggtgatgttaggaatcaaactt
ggaggtgaagtacctttcacgaaggtttatttacatccaatgatccgtgatgcacatggg
cgtaagatgtcgaagtccttggggaatgttattgacccccttgaagttataaatgggata
tcccttgaaggtcttcacaagaggttggaggagggtaatctggatcctaaagagctcgaa
gttgcaaagaaaggacagaaggcagactttcctaatggtatacctgaatgtggtacagat
gctcttcgatttgcacttgtttcatacacagctcagtctgataaaataaatttagatatc
caaagagtggtcggttatcgacaatggtgtaacaaattgtggaatgctgttcgattttcc
atgagcaaacttggggagggttttgtccctccattgaagttacatccacataacttgccg
tttagctgcaaatggattctctcagtgttgaacaaggccatatctagaactgcatcatcg
ctaaattcatatgaattttcagatgcagccagcacggtgtattcgtggtggcaatatcag
ttttgtgatgtttttattgaagcaattaaaccatattttgctggtgataatcctgcattt
gcctctgagaggagcgctgcacaacatgttctttgggtgtgcttggaaactggcttgcgg
ttgcttcatccatttatgccatttgttactgaagaactgtggcagcgccttccgcaacca
aagggctgtactacaaaagaatcaataatgttatgcgaatacccatcagctgtagagggt
tggaccgatgaaagggctgaatttgaaatggatcttgttgagtccactgtgagatgtatt
aggtcactgagggcagaggtacttgggaagcaaaagaatgaaaggcttccagctattgct
ttttgccaaactaaaggagtctcagaaattatcagaagtcatgaattggaaattgtaaca
ctttccacttcatcatctttaaaggttctattgagtggaactgatgaagctccaacagat
tgtgcgttccagaacgtgaatgaaaatcttaaagtttaccttaaggttgaagttgacata
gaagcagagcgcgaaaagatcagaactaagttgactgaaacacaaaagcaacgggagaaa
ttggagaagataattaatgctcctggttatcaagaaaaggttccatctcgaattcaggaa
gacaatgctgcaaagctcgcaaaactgttgcaggaaatcgacttttttgaaaatgaaagc
aaccgtcttgggaattcaaactag
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integrated database retrieval system
