Citrus x clementina (clementine): CICLE_v10004218mg
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Entry
CICLE_v10004218mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12121
phytochrome B
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
CICLE_v10004218mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
PAS_4
PAS_9
PAS_8
PAS_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18033413
NCBI-ProteinID:
XP_006419379
UniProt:
V4U025
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE
SGKSFDYSQSVRTTSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG
EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG
KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ
NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN
GNDEEAVGGRSTTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSE
KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD
IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA
EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGRVNGWNAKVAE
LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF
VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD
ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD
TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC
FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL
ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ
QVLADFLLNMVRYSPSAEGWVEIHVCPTLKQSSEGQTIVHNEFRFVCPILISISYLLVIL
ITCGKVHVID
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaattcacagcaccagcagcagcatcgtagaagtcaatcagcagcacaatct
tcaggcacaagcaacataagagcccaccacaacgccacagaatcaatgacggtaagcaaa
gccattgctcagtacacagtggatgctcggcttcacgctgtgtttgaacagtcgggcgag
tccggtaagtcgtttgattactcacagtcagttagaacgacgagtcattcagttcctgag
cagcaaattagtgcttacttgtcgaaaattcaaaggggtggccatattcagccctttggt
tgtactatagctgttgatgaagccacttttcgagtcattgcttacagtgaaaacgcgggc
gaaatgttaggattagctccacaatctgtgcctaatcttgagaagcaagagattttaaca
attgggaccgacgtacgcacgcttttcacttcatcaagctcagttctgcttgaaaaagcc
tttggcgctagggaaattactttgttaaacccaatttggattcattcgaagaacacgggt
aaacccttttacgcgattttgcatagggtcgatgtagggatagttattgatttagagcct
gcaaggacagaggatcctgctctgtctattgctggagctgtgcagtcacagaaattggct
gtgcgcgcgatttctcaattgcaatcgcttcctggtggggatattaaattgttgtgtgat
actgttgttgagagtgtgagacagcttaccgggtacgacagggttatggtgtataggttt
catgaggatgaacatggtgaggttgtggctgagagtaaaaggcctgatttggagccttat
tttggattacattatccggctactgatattccgcaggcttcacggtttttattcaagcag
aatagggttaggatgattgttgattgtcacgccactccactttgtgtcattcaggatgaa
gggcttatgcaacctttgtgtttagtaggttcaacacttagggctccgcatggttgtcac
gctcagtatatggctaatatggggtcgattgcttcattggctttggctgttattattaat
ggaaacgatgaggaagctgttggtgggaggagcactacgaggctttgggggttggttgtt
tgccatcacacttctgcacggtgcattccatttccacttcgttatgcctgtgagttccta
atgcaagcttttggactccaactgaacatggaattgcaattagcttcacagttgtctgag
aagcatgttctgaggacccagactcttttgtgtgatatgcttcttcgtgactctcctgct
ggaattgttactcagagccctagtattatggaccttgtgaagtgtgatggggcagcactg
tactaccaaggaaaatattacccacttggtgtaaccccaactgaaacccagataaaggat
atagtggaatggctgctgacttaccatggagactcaactggtttaagcacagacagtttg
gctgatgctgggtaccctaaggcagccacacttggtgatgcagtttgtggaatggctgtt
gcctacatcactaaaagggattttctattctggttccggtcccacacagcaaaggagatc
aaatggggtggtgcaaaacatcacccagaggacaaggatgatgggcaaaggatgcatcca
cgttcttcattcaaggcatttctggaagtggtgaagagccgcagtttgccatgggataat
gcagaaatggatgcaattcattctttgcagctgattctgcgagactcatttagggacgct
gaagcaagcaattctaaggctgttgtaaatgcccagcttgtagatctagagttgcaaggg
gtggatgagctcagttcagttgccagggaaatggtaagattaatagagactgcaactgcc
cccatatttgctgttgatgttcatggccgtgtcaatgggtggaatgcaaaagttgcagag
ttgactgggctgtcagttgaggaagctatggggaagtccttggttcatgatcttgtttat
aaggaatatgaagaaatcgttgacaatcttcttcatcatgctttaaaaggcgaggaagac
aagaatgtagagataaaattgaggacatttggtgcagaaaatcgtaagaaggcggtcttt
gtggtggtcaatgcttgctccagcaaggattacacaaataatattgttggagtttgcttt
gtgggtcaggatgttaccgatcagaaattggtgatggacaaatttattcacatacaaggt
gattacaaggccattgttcacagtcccaatcctttgatccctcccatatttgcttcagat
gaaaacacttgttgctcggagtggaacactgccatggagaagctcactgggtggagtcga
ggagatattattgggaagatgttagttggggaggttttcggaagttgctgtcgtctcaag
ggtcctgatgctttgacaaaatttatgattgccttgcacaatgcatttggagggcaggac
acggagaagtttccttttcccttgtttgaccggaatggaaaatatgtgcaagcacttttg
actgccaacaaaagggtaaatatggaagggcagattgtaggagctttctgcttcttgcaa
attgctagtccagagttgcagcaagctcttacagttcagaggcaacaggaaaagaagtgc
tttgctaggttgaaagagttggcttacatttgccaggaaataaagaatccattgagtggt
gtgagctttactaactcactcttggaggccactgacttgacagaagatcagaaacagtta
cttgagacaagtgctgcctgtgagaagcagatgttgaagatcataaaggatgtggaccta
gaaagcattgaagatggttcattggagtttgagaaggctgaatttttactcgggagtgtc
ataaatgctgttgttagccaagtgatgatgttgctgagggaaagaaatcttcagttgatt
cgagatatcccagaggaaatcaagacactagctgtttatggtgatcaggcaagaattcag
caggtcttggctgactttttgttgaatatggtacgttattcaccatcagcagagggttgg
gtagagatccatgtttgtccaacattgaagcaaagttctgagggacaaaccattgtacat
aatgaattcaggtttgtttgccccatcctcatttcaatatcatacttattggttattcta
ataacatgtggaaaggtccatgtcattgattga
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integrated database retrieval system
