Citrus x clementina (clementine): CICLE_v10004220mg
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Entry
CICLE_v10004220mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CICLE_v10004220mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10004220mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10004220mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
CICLE_v10004220mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
CICLE_v10004220mg
RSF complex
CICLE_v10004220mg
WICH complex
CICLE_v10004220mg
B-WICH complex
CICLE_v10004220mg
NORC complex
CICLE_v10004220mg
BRF complex
CICLE_v10004220mg
NuRF complex (fruit fly)
CICLE_v10004220mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DBINO
DEAD
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
18032504
NCBI-ProteinID:
XP_006419640
UniProt:
V4S2C5
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MAKPSKARESSDDALSNGSSSSEEEQINDQINEDDEEELEAVARSADADSDDDNSPASED
EAAADGDDVEEDDDSGANADISKREKQRLKEMQKLKKQKIQELLDKQNAAIDADMNNRGK
GRLKYLLQQTELFSHFAKGDQSASQKKAKGRGRHASKLTEEEEDEEYLKEEEDGLSNTRL
VTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIT
GPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEM
AIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWS
LLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKE
TILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPP
YTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDG
NTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQD
RAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQM
VRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDF
DDEKDENKFDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQGGPAKPKEPRIPRMPQL
HDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKDTIDVEEPEDVGDPLTAEELEEKERLLE
EGFSSWSRRDFNTFIRACEKYGRNDIKSIASEMDGKSEEEVERYAKVFKERYKELNDYDR
IIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMV
HKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQA
RKEKKLAKNMTPSKRGGGRQPNESPSSLKKRKQLSMDDYGKRRK
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccctcgaaggcgcgggaatcgtccgatgatgccttgtccaacggctccagt
tcgtcggaggaagagcaaatcaacgatcagatcaacgaagacgacgaggaggagctcgaa
gccgtggctcgctctgctgatgctgactctgacgacgataactctccggcgtccgaagac
gaggccgctgccgacggagacgacgttgaagaggatgacgacagtggggctaatgcagat
attagcaagcgtgaaaagcagagactaaaagaaatgcagaaattgaagaaacaaaagatt
caggaactattggataaacaaaatgctgctattgatgctgatatgaacaatagggggaag
ggccgattgaagtatctattgcagcaaacagagttgttttctcattttgcgaaaggcgat
caatctgcatctcagaagaaggcaaaaggaaggggacgccatgcatctaaactcactgaa
gaggaagaagatgaagaatacctcaaggaagaagaagatggtttgtcaaacacgcggctg
gtaacacaaccgtcttgtattcagggaaaaatgagggattaccaacttgctggattgaac
tggcttatacggttatatgagaatgggataaatggaattcttgctgatgaaatgggtctt
ggtaaaaccttgcaaaccatatccttgttgggctaccttcatgagttcagaggaattact
ggccctcatatggtggttgctccaaaatctacccttggtaactggatgaacgaaattcgt
cgtttctgcccagttttacgtgctgtgaagtttcttggaaatcctgaagaaaggagacat
atacgtgaaaatttactggttgctgggaagtttgatgtctgtgtaacaagttttgaaatg
gccattaaagagaaatctgctttgcgtcgttttagctggcgttatattatcattgatgaa
gctcatcgaattaagaatgaaaactctcttctttcaaagacaatgagactttataacacc
aattaccgccttctcatcacgggtactccacttcagaacaatcttcatgaattatggtcc
cttctaaactttttgcttccggagatatttagttcagctgaaacttttgatgaatggttc
caaatttctggcgaaaatgatcagcaggaagttgtccaacaacttcacaaggtcctccgg
ccgtttcttcttcgaagattgaagtcagatgttgagaaaggtttacctccaaaaaaggaa
actattctcaaagtgggcatgtcccaaatgcagaaacaatactacagggcattgctacag
aaagaccttgaagttgtgaatgcaggtggggaacgaaagcgtcttcttaacatagcaatg
cagcttcgtaaatgttgtaatcatccatatttgttccaaggtgctgaacctggccctcct
tatactaccggggatcatctaatcacaaatgctggtaaaatggttcttctggataagttg
cttccaaaactaaaggaacgtgattctagggttttaatattttctcagatgacaaggctc
ttggacattcttgaagactatttaatgtttcgtggatacctgtattgtcgaattgatgga
aatactggtggagaagatcgggatgcttcaattgaggcctttaataaaccaggaagtgag
aaatttgttttcctcttgtcaactagagctggaggacttggtatcaatcttgccactgcg
gatgttgtcatcctctatgatagtgactggaatcctcaagttgatctgcaagcacaggat
cgtgcccataggattggtcaaaagaaagaagttcaagtgttccgattttgcacagagtat
accattgaggagaaagttattgaaagggcatataaaaagcttgcacttgatgctctggtg
attcaacaaggacgattagctgagcagaaaactgtaaataaggatgagctgcttcagatg
gtgagatttggggctgaaatggttttcagttccaaggatagcacaattacagatgaggat
attgacagaattattgctaaaggagaagaggcgaccgctgagcttgatgccaaaatgaag
aaatttacagaagatgcaatcaaatttaaaatggatgacacggctgaattgtatgatttt
gatgatgagaaggatgagaacaagtttgatttcaagaagatagttagtgataactggatt
gaacctccaaagagagagcggaaacgcaattactctgaatctgagtactttaagcaaaca
atgcgccaaggtggtccagcaaaaccaaaagaacctcgaattcctcggatgcctcagctg
catgattttcagtttttcaacactcaaaggctaagtgagttgtatgaaaaagaagtacgc
tacttgatgcaaacacatcagaagaatcagctaaaagacaccattgatgtggaagagccc
gaagatgtgggagatccactgactgctgaagagttggaagaaaaggagcgattgttagaa
gaaggattttcttcttggagtagaagagatttcaatactttcattagggcttgtgagaag
tatggccgaaatgacataaaaagtattgcctcagaaatggatggaaaatctgaggaggaa
gttgaaagatacgctaaagttttcaaagaacgatacaaggagctaaatgactatgatagg
attattaagaatattgaaagaggagaggctagaatttctcgaaaagatgagattatgaaa
gccattgggaagaaattggatcgctacaagaatccatggctggaactaaagattcagtat
ggacagaacaaagggaaattatacaatgaagaatgtgatcgtttcatgatatgcatggtt
cacaagcttggatatggcaattgggatgagctgaaggcagcatttcgcacttcaccctta
tttcgatttgactggtttgtgaaatcccgtacaactcaagaattagctaggagatgtgat
actctcattcggttggtggagaaggaaaaccaggaatatgatgaaagagaaagacaggcc
cgtaaagaaaagaagcttgccaagaacatgacaccatcaaagcgtggtggggggaggcag
ccaaatgagagccctagttccttaaagaaacggaagcaattatcaatggatgactatgga
aagaggaggaaatga
DBGET
integrated database retrieval system
