Citrus x clementina (clementine): CICLE_v10004283mg
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Entry
CICLE_v10004283mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10004283mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10004283mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
CICLE_v10004283mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CICLE_v10004283mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
CICLE_v10004283mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
AAA_22
UvrD-helicase
Mov-10_helical
ATPase_2
AAA_16
Helicase_RecD
AAA
DEAD
SLFN-g3_helicase
UvrD_C
FR47
Cep192_D4
AAA_7
Mg_chelatase
AAA_24
Motif
Other DBs
NCBI-GeneID:
18032492
NCBI-ProteinID:
XP_006419983
UniProt:
V4RH06
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MMDTVGDDNWGNEWEKRDIGFIDFEDYKSECSYNPSEEDPVQISFPFPFIDGKPQSVSVG
ETAVESITIKNTTREPVELWSKIYASTPENTFTLSVMKPPSPGSDSGTNRGFVEFFTLEE
RMIQPGQTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVAFLLAEDKISQSLASKRPYSRG
GRKKQFSVDKYVVGSRPARYRGQIYQNRLPRYDIPNDIRELIERKQIPDAITDGLTLKNY
TSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKH
AYEDTSSAYQGFIHRVEADEVHLKFASDFHLNHRDENLYNVQFTYNRVNMRRLYQATDAA
QELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTG
KTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRP
YEDVNADHIRFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDE
AGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPY
CHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLF
FGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKAL
ESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRA
ISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAECWNHEEEI
PQSFQEDNWNQEPFQAENLKPVKDEDEWSDGWHL
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgatggatactgttggtgatgataactggggcaatgaatgggaaaagagggatattggt
tttattgatttcgaggattataaatcggagtgtagttacaatccaagtgaagaggatccc
gttcaaatttctttcccattcccttttatagatgggaagcctcaatctgtatctgttggg
gaaactgctgtagagtcaatcaccattaagaacaccacccgtgaacctgtggagctttgg
agtaaaatttatgcctcaactcctgagaatactttcactctctctgtgatgaagcctcca
tccccagggtcagattcaggtactaacaggggttttgtggagttttttacgttggaggaa
cgaatgatccagcctggtcagaccttaaccatctggttatcttgcaagcccaagggaatt
ggactgcacacgacagttttgcaatttgatgtggaagataggatagaacgagtggctttt
ttattggctgaagataagatctcacagtctttggcttcaaaaaggccttattcaaggggt
ggaaggaaaaagcaattttctgtggataaatatgttgtgggttcacgtcctgcaaggtac
agaggccagatatatcaaaataggcttcctcgatatgatattccaaacgatattagagaa
ttgattgagcgcaagcaaatcccagatgctattacagatggacttacactgaagaattat
acttcttttttcaagacattattgatcatggaagaaattcaactgaaggaagacatgagg
gcttatgacatggagaatgttaccttgatgagaaaggggctatatttgtcccttgtggtt
ccagggcttgctgagagaagaccctctcttgtcaatggagactttatttttgccaagcat
gcttatgaagatacatcatctgcttatcagggttttatccaccgtgttgaggcagatgaa
gtgcatttgaagtttgcctcagattttcacttaaatcaccgagatgagaatctttacaat
gtacagttcacatacaatcgagtaaacatgagaaggttatatcaagccactgatgctgca
caggagttagacacagaattcctttttccatctgagtcctctggaattagattaattgag
tcgaatacattggtacctatttcctgtaaccttaacgaggagcagatgtgttcaattgaa
aagatccttggcttgaaaggagcacctccttatctgatttatggacctccaggtacgggg
aagactatgacactggtcgaggcaatccttcaactctacgcaactcgagaagatgctcgg
cttcttgtctgtgcaccttcaaatagtgcagctgatcatttgctggagaaaatcctgggc
gagaaggctgttgaagttcgggagaatgagatattcaggcttaatgcaccttctcgtcca
tacgaggatgtcaatgctgatcatattcgcttttgcttttttgatgagcaaatcttcaaa
tgtcctccgcttgctgctcttgtttgctacaggatcataatatcaacttatatgagtgct
tctcttatttatgctgaaggtgttgatcgtggtcacttctcccatattttcttggatgag
gctggccaagcttctgagccagaaagcatggttcccatatcatcttactgcaaaaaggac
actgtcgttgttcttgctggggacccgatgcaattaggtccagtaatatactccagggaa
gcagagacttacggaatggggaaatcatacttagaaaggctgtttgaatgtgaaccttat
tgccatgggaatgaaaattatgtaacgaaattggttagaaattaccgatctcacccacaa
attttgcatctcccttcaaagctattctacgaagaggaactgattgcatgtaaagatgaa
tctatttcctgcacagcctatctgaactttcttcctaacaaggaattccctgttcttttc
tttggtattcaaggctgtgatgagagagaaggcagtaatccttcatggttcaatcggatt
gaagttagcaaggttgtagagatcatccagaaattgacatcaactggaaatctgagtgag
gaagacattggggtcataacaccatacagacagcaggtactgaagttaaacaaggccctc
gaaagcttgtatatgcctgatataaaggttggcagtgttgaacagttccaaggacaggaa
agacaagtcatcattgtatctactgtccggtcaacaatcaaacacaatgattttgacaga
aaacactgtttaggatttctgagcaatccaagaaggtttaatgtggctgttacccgggcc
atatctttgcttatcattattgggaatccacacattgttagtaaggacccatactggcat
cagcttttatggtattgttcagacaacaattcttatcagggctgtgctctccctgaaagg
gaggagtttgctgatgaagatccaacagcggctgaatgctggaatcatgaagaagaaatt
ccacaatcgtttcaagaagataattggaatcaagagccctttcaagcagaaaatcttaaa
cctgttaaagatgaagatgagtggtctgatggctggcatctgtga
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