Citrus x clementina (clementine): CICLE_v10004294mg
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Entry
CICLE_v10004294mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10004294mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10004294mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CICLE_v10004294mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_2
TPR_12
TPR_8
TPR_1
TPR_7
Motif
Other DBs
NCBI-GeneID:
18031443
NCBI-ProteinID:
XP_006421290
UniProt:
V4S6P9
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MAGEQDMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTIRTETPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPTEATSVEEYLQQVHEVAMVSAIQEA
QTDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPKTNMTDTSTGGTLPGQMASMAS
SPQISSGPSGMELVPLANKPLLEKKATVYAEVVKNLNNARQQALPFKPATAFKGAYESLA
IESSSGKSVNIQKIWHLLQTMMGEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQS
HPAQAALGGVVGNLQRVRAFLRIRLRDYGVLDFDTGDTRRQPPVDTTWQQIYFCLRTGYY
DEARNVALSSRASNQFAPLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKK
KLLLYAIISGSRRQIDRLLRDLPTLFGTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYS
LDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQVLPAVLYLSKESGDEGYNIDAAHIS
IVLADHGVLSEGSGAGKKLGLMDPYAEASSIIRQYGSAYLRLGNLQMALEYYAQAAAAVG
GGQLSWTGRANVDQQRQKSLMLKQLLTELLLRDGGIYLLLGSRGAGEEGELGRYITDLKA
RQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAIFAMSRGRLDGESQT
ASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILSVHKMARSGHYLDALREV
AKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCLDNVTDTDGSLRAMRAKIA
NFLANNMNQNWPRDLYERVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgagcaagacatgagtggctggaccgatcttcttcactcctcaacgaagctt
ctcgaacaggcagctccctctgctcagttccctcctcttcagaggaacttagatcaacta
gaagcattgtcaaagaagctcaaggcaaaaaccataagaaccgagactccttctcagtct
attgcagccacaaggctacttgcacgtgagggaataaatgcggaacagcttgctagagat
ttgaagtcatttgaattgaagacaacatttgaggatgtttttcccactgaggcaactagt
gtggaagaatatctgcaacaggttcatgaagttgcaatggtgtcagccatccaagaagct
cagacggataaccttagaagttttaatgattacatgatgaaagttctggaggaagactgg
cagaaagagaaacgtgactttcttcagagcttaagccgaatttcaacattacccaagact
aacatgactgatacgagcactggaggtactcttcctggtcaaatggcatccatggcttct
agtcctcagatttcctcaggtccttctgggatggagcttgtacctttagctaataagcca
cttcttgagaaaaaagcaactgtctacgctgaagttgtgaagaacctgaacaatgcaagg
cagcaagcactgccatttaaacctgctactgcttttaagggcgcttatgaaagcttggcc
attgaatcatctagtggaaaatcagttaacatacagaaaatatggcaccttcttcagaca
atgatgggtgagcatgcaactgtgcaacagactgcttcaagaaagatgtcacttgtaatt
ggtgcaaggcgccacctggaatggggacacgagaagtatattatggatactatacaaagt
catcctgcacaggctgcccttggtggagttgttggaaatttacagagagttcgggctttt
cttcgaatacgattaagggattatggagtcttggattttgacactggtgacactcgtagg
cagcctccagttgataccacttggcagcagatttatttttgcttgagaactggatactat
gatgaagcaagaaacgttgccctatcatcccgtgcttcaaaccagtttgctcctttgctt
acagagtggataaacactggaggtatggtgccgccggagattgcagctgctgcttctgaa
gaatgtgataaaatgttgagaatgggtgatcgagtaggtcgagctgcatatgacaagaaa
aagttgctactctatgctatcatatctggctctcgccggcaaattgaccggctgctaaga
gatctaccaactcttttcggtactatagaggattttttgtggttcaaactttcagccata
cgggatgtacccagtgaagctccttctgttgtcctgagcgatggcttggccccatacagt
ttggatgatttgcaggtttacctaaacaagtttgatccatcatattatacaaaaaatgga
aaggaccctctggtatacccttatgtgttgcttttaagcattcaggtgctaccagctgtt
ctttatttatctaaagaatcaggtgatgaggggtataatattgatgctgcccacatatca
attgtgctagcagaccacggggtcctttctgaaggttctggtgctggaaaaaaactggga
ttgatggatccatatgcagaggcatccagcataattaggcaatatgggtctgcttatctt
cgtcttggcaatctccagatggcattagaatattatgcacaagctgctgctgcagtaggt
ggtggacagttgtcgtggactgggagagctaatgttgatcaacaaaggcagaaaagcttg
atgctgaagcaacttctaactgaactattgttacgagatggtggaatttatcttttactt
ggttcaagaggagctggggaggaaggtgaattgggacgatatataactgatctcaaagct
agacaacagtttttacttgaagctgctgggcagtgtcaggaagctgggctttatgataaa
tctatagaacttcagaagagagttggagccttctcaatggcattggatacaattaacaag
tgtctctcagaagcaatttttgccatgtcccgtggtaggttggatggtgaaagtcagact
gctagcctaattcattctggcaacgaaattttggagatggaaaaatattatcctgaagtc
agtcttcatgaacgagagcaagttctggagcaacagactgtattgagacagcttgaggca
atattgtctgtccataagatggcaaggtcaggccattatttagatgctttgagggaggtc
gccaaactcccatttcttccatttgatccacgagttccagatgccatggttgatgtgttt
cagagtttatctcctcacgtccaagcttgtgtgcctgacctactgagggttgctctaact
tgtctggacaatgttacagataccgatggatcgcttcgtgccatgagggcgaagattgca
aactttcttgctaacaatatgaatcagaattggcctcgtgatttgtatgaaagggttgcc
cggagcttgtga
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