Citrus x clementina (clementine): CICLE_v10004340mg
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Entry
CICLE_v10004340mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10004340mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CICLE_v10004340mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
Helicases
CICLE_v10004340mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18032755
NCBI-ProteinID:
XP_006420409
UniProt:
V4U373
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MAASSPLLTSEHSKKTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELD
GGFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQ
KQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNEL
RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE
EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG
GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR
ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS
LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI
LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKAIDRFRANEHGIL
VATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIAIISPNDTSKFVT
LCKSFSKESFQRFPLENSYMPEVMKRMSLARQIDKIMRKDSQEKAKKTWFERNAEAIELV
VDNYDSEEEVVKNRKQKKATSMQLKKLQQELNAMLSRPLQPKTFSRHYLAGAGVSPLLQR
QLEEIAKEKLPDSKSAIENKRRKLVVIGQDCVEPLQALRNAGHEVHMDGKEMAEKRRNLD
SLRRKRKEEKKCLRDQRRKQRKKMKGTE
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggccgccagttcaccgctgctaacctccgaacattcgaagaagacaaagcccaacagg
agaaaacgaacccgaaagggcggagaagccgaaaagctcgactctctcaaatggaaccac
tctttctcagccgaagacaacgacccttttgccttcctcgttggctccaatgaactcgac
ggaggttttctttcacttgaagagattgatgaagccagttataatttgcaaattccaaaa
cccgagaagggaaagcctgggaagaagctgaattcgaagaaaaggaaacgtagtagtgcc
aatgaggaggattctggtgatggggatggggatggggatgaagatggaagtggagtgcaa
aagcaggaagagaagaatttgaagaatgagacaggaaagaaaaagaagaagaaaaagaag
ggaaagaaaattaagacagttgaggaatctgttgctgttagcaatggtccagatgatgct
gaagaagagttagtcaatgaagctgaaatttcaacagaatttgatgcatggaatgaatta
aggcttcatcctctgcttatgaaatcaatttacaggcttcagttcaaggaaccaacccca
attcagaaagcatgtattcctgctgcagctcatcaagggaaggatgtaattggtgcggct
gagacagggtctggtaaaacgcttgcttttggtttgcccattatgcaacgtctattagaa
gaacgagaaaaagctgcaaagatgctggaagacaaaggggaggaagcagaaaaatatgct
ccaaaagggcatttgagagctcttatcattacccctacgagggaacttgcacttcaggtc
actgatcacttaaagggagttgctaagggtatcaatgttagggtggttcctattgttggt
ggaatgtcaacagagaagcaggaaagacttttaaaagcaaggcctgaggtggttgttgga
actcccgggaggttgtgggaacttatgtcaggaggagaaaaacatcttgttgagttacat
acactgtcgttctttgtgctggatgaggctgatcgaatgattgaaaatggacattttcga
gagttgcagtcaataattgacatgcttcctatgaccaatggctctaataaggggcagtct
gaacaaacacaaaattgtgtaacagtttccagcttgcagagaaagaaaagacaaacactt
gtattttctgcaactatagccttatcagctgattttcgtaagaagctaaagcatggttcg
ctaaaatcgaagcaatcggttaatggattaaattctatagaaactctttctgagcgagca
gggatgagagctaacgtcgctattgttgatttgacgaatatgtgtgtcttggcaaataag
ctggaggagtcatttattgaatgcaaggaagaagataaagatgcctacttgtattacatt
ttgagtgttcatggacaaggccgtacaattgttttctgtacgtccattgcagctttgcgc
catatttcttccctcctgaaaattcttggcatagatgtttggacacttcatgctcagatg
caacagcgagctcgtttgaaggcaattgatcgtttccgtgcgaatgaacatggtatactt
gttgctactgatgttgcagcaagaggccttgatattcctggtgttcgaactgttgttcac
tatcagcttccacattcagcagaagtgtatgttcatagaagtggacgaactgctagagct
tctgctgatgggtgcagtattgctataatatcaccaaatgatacatccaaatttgtcact
ttgtgcaaatcattttctaaggaaagtttccagcgatttccccttgagaactcatacatg
ccagaggtcatgaaacgaatgtctcttgcacgtcaaattgataaaataatgcgaaaagat
tctcaggaaaaagcaaagaaaacctggtttgaacgaaatgcagaagcaatagaattagtt
gtggacaactatgacagtgaggaggaagtagtaaaaaatcgtaagcaaaagaaagcaacc
tccatgcaattgaagaaattacaacaggagctcaatgcaatgctttcacgtccattgcag
ccaaaaacattttcacgtcattatttggcaggggctggtgtatcacctctcctgcagcgt
cagttggaagaaatagctaaagaaaagctgcctgacagcaagagtgcaatagaaaataaa
agaaggaaattggtggttattggtcaagattgtgtggaaccactccaggcactccgaaat
gctggtcatgaggtgcacatggacggaaaggagatggcagaaaaacgaagaaatctggac
agtttgcggagaaaaagaaaagaagagaaaaaatgtcttcgtgatcagcgtagaaagcag
aggaagaaaatgaaaggaactgaatag
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