Citrus x clementina (clementine): CICLE_v10004345mg
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Entry
CICLE_v10004345mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Module
cic_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10004345mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
CICLE_v10004345mg
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
18033014
NCBI-ProteinID:
XP_006419502
UniProt:
V4RY80
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MAIAKRACTSIAAISLLLCYSAVVSCEVTTGEATGEFNVSAANARANAINRGILDPTAKV
FNVLQFGAKPGDKEDRHNIDSNHMAFVKAFEAACHHEGKARLVIPRGTFVLGPVTFMGPC
NNTPLIVQIQGTIKAITDISEFPGQGEEWVNFQNINGLVVTGSGTFDGQGASCWKYRDTK
NDNNVPGQRLPANIQFVEVSNAIVRGITSVNSKGFHYFITGCKNIRLYHLNIIAPDESPN
TDGIHISQSDVVKIAKSYIGTGDDCVGMIRGSSNVSVKKVTCGPGHGISVGSLGKYDNEA
DVKGIIVKDCTLVGTQNGLRIKTYEGKSESRASSMIFQDIVMKDVKHPIIIDQFYGGKDK
KMVALGMSSSVACLSFLYITSVLSASWQPTPAPKPNSPVSSPNPEAKSPDPSPATADSPE
TQLPPTAEGLFDVTDYGAEPDGETETSSPFLEAWNAACSHNGDSTFYIPEGTFLLGPVSI
TGPCHNNQPPKIVIKGTLMAPPNLSAFPDTNWIVFQDLHGINISGGNGEVPNIDAQGEVE
AWKRNSCSKSEKCNKLITSLRFNNVSHGTISNIAVSNSKGFHVAFLDCDNINVYNVSISS
PGDSPNTDGIHVGMSTNINITSSNIGAGDDCISIGPGSSNISVADVKCGPGHGISIGSLG
KYTDEEDVVGINVRNCTITGTQNGVRVKTWPGAPASRASNLMFTDIVMINVSNPIIIDQE
YCPSNSCKSTSEPSLVELSNIHFKNISGTYNTESGVTLICSSGVPCENIHLIDINLNPTE
PETPREGRFNVKGVVNGLEILNSSF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgcaaaaagagcttgcaccagtattgctgccatatctcttctcttgtgctac
tcagctgtggtctcttgtgaggtcaccacgggtgaggccactggagaattcaatgtctcc
gcagctaatgctcgcgcgaatgctataaatcgaggcattttagaccctaccgcgaaagtt
tttaacgtgttacaatttggtgcaaagcctggcgacaaggaagatcgtcataacattgac
agtaaccacatggcatttgttaaggcatttgaagctgcatgtcatcacgaggggaaagca
aggcttgttataccaagaggtactttcgtgcttggccctgtcacgtttatggggccatgc
aacaacactcctctgattgttcaaatccaaggaacaatcaaagccattactgatatttcc
gaatttcctggacaaggagaagaatgggtcaatttccaaaacattaatggattagtagtt
actggtagtggcacatttgatggccaaggtgcttcttgctggaaataccgtgacacaaag
aatgacaacaacgtccccggccaacgcctcccagcaaatatacaatttgttgaggtgtca
aatgcaattgttagaggaatcacttcagttaatagcaaagggttccattatttcatcact
ggatgcaaaaacattagattgtaccacctcaatatcattgccccggatgaaagccccaac
actgatggcattcatatcagtcaatctgacgtagtgaagatagccaaaagttatattggc
acaggtgatgattgcgttggtatgatccgaggatccagcaacgttagtgtcaagaaagtc
acttgtggccctggacatggcataagtgttggtagccttggcaagtatgataatgaggct
gatgtgaaagggatcattgtgaaagattgcacacttgtgggcactcagaatggactgaga
atcaaaacatatgaaggcaaaagtgaaagtcgagcctcaagcatgatttttcaggacatt
gttatgaaagatgttaagcaccccatcattatagatcaattttacggagggaaagataag
aaaatggtggcactcggcatgagcagcagtgttgcttgtttgtcctttctttatataacg
tccgtcctgtctgcttcgtggcaaccaactccagctcccaaacccaattcacctgtttca
tctccaaatccagaagccaagtccccagacccatctcctgctacagctgattctcctgaa
acacagttaccgcctaccgcagaaggcctttttgatgtcaccgactatggagcagaacct
gacggggaaaccgagactagctccccattcttagaagcatggaatgctgcatgttcacac
aatggagactcaactttttacataccagagggaacattcttgctcggtccagtatcaatt
accggcccttgtcataacaaccagcccccaaaaatagtgatcaaaggaactctaatggct
ccaccaaatctcagtgctttccctgataccaattggattgtctttcaagatttgcacggc
atcaatatcagtggaggaaatggtgaagtgccaaacatagatgcccagggtgaagtagaa
gcctggaaacggaatagctgcagcaagtcagagaaatgcaacaaattaatcacatcactg
agattcaacaatgtttcccatgggactatcagcaacattgctgtatcaaatagcaagggc
ttccatgttgctttccttgactgcgacaacattaatgtctacaatgttagtattagttct
cctggtgacagtccaaacaccgatggaatccacgtcggtatgtcaacgaatatcaacatt
acatcatccaatattggagccggtgatgattgcatctccatcggaccgggcagcagcaac
atttctgttgctgatgttaaatgtggtccaggccatggaatcagcattgggagccttggc
aagtacacggatgaggaagatgtggtaggcatcaatgtaagaaactgcacaatcaccggc
acacagaacggcgttagagtaaagacgtggcctggagctccagctagccgtgcttctaac
ctcatgttcacagacattgtcatgatcaatgtctcaaaccccataatcatagatcaggaa
tactgtccatcaaatagctgcaagagtacttctgagccctcattggtggagctcagtaac
attcacttcaagaacatcagtggcacttacaacaccgaatctggagtcactttgatatgc
agttctggtgtcccttgcgagaacatacaccttattgacattaatctcaaccccacagaa
ccagaaacgccgcgggaaggcagattcaatgtgaagggtgttgttaatggattagaaatt
cttaattctagcttttga
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