Citrus x clementina (clementine): CICLE_v10004398mg
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Entry
CICLE_v10004398mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10004398mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CICLE_v10004398mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
18033269
NCBI-ProteinID:
XP_006420701
UniProt:
V4SAG2
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MKREYAEISEISDEEWEPHSESFKPSRVLKINTRSPKPKPKPKPPPPIESFAYNKDENLE
DDDVEEVVGPTAATNNRGRRFIVDDDEEEEEEEEGEEEQEQEHGDFVEVYDIKSSSQEEE
EEELLILEDEIENDDVVGKALQKCAKISAELKRELYGTTTSAACDRYAEVEASSVRIVTQ
SDIDDACGDEDSDFQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLML
LKHLNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLP
PPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARN
ANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPF
ILRRLKSDVMQQLVPKIQRVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIV
GVLPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEEL
KNYSDFSIHQLLRSYGGADTRGILSEEHVMLSAKCRVLSKLLPSLKKGGHRVLIFSQWTS
MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA
DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTLILLLHVFSELFNCCKLVW
CMLLLYLLKSSAG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgaatacgccgaaatctcggaaatctcggacgaggagtgggagccgcactcc
gagtcattcaagccctctcgagtcctcaaaatcaacactcgatcaccgaaaccgaaaccg
aaaccaaagccacctcctccaatagaatctttcgcttacaacaaggacgaaaatctcgag
gacgacgatgtcgaggaggtggtgggacccacggccgccacgaacaatcgtggccgtcga
ttcatcgtcgatgatgatgaagaggaggaggaggaggaggagggagaggaggagcaggag
caggagcacggagatttcgttgaggtttatgacataaagtcttcgagtcaagaagaagaa
gaggaggaacttttaatcttagaagatgaaattgaaaatgatgacgtggtagggaaggcg
ctgcaaaagtgtgccaagatatcagctgagcttaagagagagctgtacggtactactact
tctgctgcttgtgatcgatacgccgaagtggaagcctcttccgtgagaattgtgactcag
agtgatattgatgatgcatgtggagatgaggattctgattttcagcctgttcttaagcct
tatcagctcgtcggcgtcaactttcttctattgttgtacagaaagggcattgcgggagcc
atattggcagacgagatgggtcttgggaagaccattcaggctataacatatctaatgttg
ctgaaacacttgaacaatgaccctggtcctcatttaattgtatgtcctgcctctgttttg
gagaattgggaaagagaacttaagaagtggtgtccatcgttttctgtactccagtatcat
ggggcagggcgaacagcctattccagagaactgagctctttagcaaaagctggattgcca
cctccttttaatgtgcttcttgtgtgctattcgctttttgaacgtcacagtgtgcagcag
aaagatgaccgtaaaattttgaaacgttggcgttggagctgtgtgcttatggatgaggcc
catgccttaaaggacaaaaacagctacaggtggaaaaaccttatgtctgttgctcggaat
gcaaaccagcgtctgatgctgacagggaccccgttacaaaatgatttacatgagctctgg
tcattattggagtttatgatgcctgatctttttgccacagaggatgtagatttgaagaag
ctactcaatggtgaagatagagatttaattggtcggatgaagtcaattttggggccattc
atcttgaggcgtttaaaatccgatgtgatgcagcaacttgtcccaaagatacagcgtgtt
gagtatgttacaatggaaaggccgcaggaagatgcatatagagtagccattgaggagtat
cgggctgtgtctcgagctcgtattgctaagctttctgacgctgacttggctactattgtt
ggtgttcttcctcagcgtcaaatttccaactattttgttcagttccgtaagattgcaaat
catccgttattggtgagacgaatttacagtgatgatgatgttgttcgctttgctaaaaag
ctgcatcctatgggtgcatttggctttgaatgtaccttggaaagagtaattgaagaactg
aagaattacagcgatttttctatacaccagcttttacgctcctacggtggtgctgatacc
agaggaattctttcagaagaacatgttatgctttcagcaaaatgtcgggtattatctaaa
cttctcccttcactgaaaaaaggtggtcatcgggttttgatttttagccaatggacgtca
atgcttgatattctggagtggactttggatgtgattggtgttacatatagacgtcttgat
ggaagtacccaagtgacagagaggcaggctatagtcgacgccttcaataatgacacttct
atttttgcatgcttgctttcaacaagagctggaggccagggtttaaacttgactggcgcc
gatactgtcgtcatccatgacatggatttcaatccgcaaattgaccgtcaagctgaagat
cgttgtcatcgaattggccaaacaaggccggtaaccatatacaggtcatttaaacatccc
actcttattcttctcttgcatgtatttagtgaactttttaactgttgcaaacttgtatgg
tgtatgcttttgctctatctgctcaagtcctctgcaggctag
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