Citrus x clementina (clementine): CICLE_v10004459mg
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Entry
CICLE_v10004459mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10004459mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10004459mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CICLE_v10004459mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
Helicases
CICLE_v10004459mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
CICLE_v10004459mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
18032920
NCBI-ProteinID:
XP_006421777
UniProt:
V4S3X2
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MPSIALFDGKEVKDEKKMNKKMALKDFEETEAALTEKSSDKKKSKKKESSKKRKESEIEE
EEERSETSSELGEPVNLKSEKEKKKKKKAKVEPEAGVEEQERGESEHPNAVSRFRISVPL
REKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASK
KTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDV
VIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLF
SATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCY
SSGGRTIIFTETKESASQLADLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAA
RGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSKIERESGVK
FEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGLSAAELLAKALAK
AVGYTEIKSRSLLSSLEDHVTVVLEAGKPIYTPSFAFGVLRRFLPEEKVELVKGMALTAD
GNGAVFDVPVADLDLFRSGADNAANVSLEVLKQLPPLQEREQSRGRFGGGGRGGFGGRGG
NRFSGGRGGGFSDRRNDRFSGGFRGSKGRGGGNRW
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatcgctttgtttgacggaaaagaagtgaaagacgagaagaagatgaataag
aaaatggctctcaaggacttcgaagaaacggaggcggcgttaactgagaagagttcggat
aagaagaagagcaagaagaaggagagtagtaagaagcggaaggaatcggagattgaggag
gaggaagagagaagcgaaacgagctcggagttaggcgagccggtgaatttgaaatcggag
aaggagaaaaagaagaagaagaaagcgaaagttgagcctgaggctggagtggaagagcag
gagaggggtgaaagcgaacatccgaatgcggtttcgaggtttagaatatcggtgccatta
agggaaaagctcaagtccaaggggattgagtctttgtttcctattcaagctatgactttt
gatatggttcttgatggctctgatttagtcggacgtgcacggaccggtcagggtaaaact
ttagcctttgtgttgccaattttagagtctctaacgaatgggccaacaaaagcgtccaag
aagactggatatggcagggctccaagtgttttggtacttttgcctactagggaattggcc
aaacaggttcatgaggactttgatgtctatggcggggcagtgggactgacctcatgttgc
ttatatggaggagctccttatcatgctcaggagtttaaattaaagaaagggattgatgta
gtcattggaacccctggacgtattaaggatcacattgagaggggcaatattgacttgagt
tcattgaagtttcgggtccttgatgaggctgatgagatgcttaggatgggtttcgttgaa
gatgttgaacttattctgggtaaagtcgaggatgctaataaagttcagacacttctcttc
agtgccaccttgccaagctgggtgaagcatatttccaccaagtttcttaaatcagacaag
aaaaccatagatcttgttggcaatgagaaaatgaaggctagtaccaatgtccggcatatt
gttcttccttgttctagttcagcgagatctcaagtcattcctgatatcattcgttgttat
agcagtggaggccgaactattattttcaccgagacaaaggaaagtgcttctcagcttgct
gacttgctgcctggtgcacgggctttacatggggacatacagcagtctcaacgtgaggtg
acacttgctgggttcaggtcaggaaagttcatgacattagttgccacaaatgtggcggca
cggggtttggacattaatgatgtgcagttaattattcagtgtgagcctcctcgtgatgta
gaagcctatatacatcgatctggacgtactggaagagcaggcaatactggagttgctgta
atgctttatgatcctagaaagtcaagtgtatctaagatagaaagagaatctggtgtgaaa
tttgagcacatatctgctccacagccagctgatattgccaaggctgcaggtgtggaagct
gctgaaacaataacccaagtttctgatagtgtaattcccgctttcaagtccgctgctgag
gagctgttgaataattctggtctatcagcagcagagctgcttgcaaaagcactagccaag
gctgtaggttatactgagataaagagtagatcacttcttagttctttggaggatcatgtt
acagtggttcttgaagcaggaaagcccatctacacaccatcctttgcttttggtgtcttg
agaagattcttgcctgaggaaaaagtagagttagtgaagggtatggctctgaccgctgat
ggaaatggtgcggtttttgatgtaccagtggcagatttggacttgtttcgatctggtgcg
gacaatgctgctaacgtcagcttggaagtgttgaaacaattgccacccttgcaagaaagg
gaacagtcaagaggaagatttggtggtggtggtcgtggtggctttggtggaagaggtggt
aacaggttttcaggtggcagaggtggtggattttctgataggagaaatgataggttctcc
ggtgggtttagaggtagtaagggtcgtggtggtggcaacagatggtga
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