Citrus x clementina (clementine): CICLE_v10004470mg
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Entry
CICLE_v10004470mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
CICLE_v10004470mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10004470mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
CICLE_v10004470mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
18031346
NCBI-ProteinID:
XP_006419443
UniProt:
V4RFQ4
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MNLNNDKGSMSTASSSVTVSDQFPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAE
IALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTH
GACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANE
GNWRTSKRRKDEEEEMEERDDTSTLKKPRVVWSVELHQQFVSAVNQLGIDKAVPKKILEL
MNVPGLTRENVASHLQKYRLYLRRLSGVSPHQGNSFISSHSQEPPYGSLSSLSGLDFQTL
AATGQIPAQSLATLQAAGLARSAAKPGLPMPLVDQRNIFSFDNQKLRFGEGQPQHMSSGK
QMNLLHGIPTTMDSKQLVNLHHSAQSLGSLNMQASAHGNPSGQSSPLLMQMAQPQSRGQI
LTETSGGQVPRLPTSVGHPILSNGAAGAMLARNGIGENSRGTGYNSVSQTSSVLNFPLNH
SAELPGNSFPLGSTPGISAGMSTLTTKGGFQEEINSDIKGSGGFMPSYDIFNDLQQHKPH
NWELQNVGFAFDASQHSNSLQASVDVTPSVLVNQGYSSSPRNVQNSNVSAMGKPIFSVGE
GSEHGNALNVGQHLNSLLVDNSTRVKSERVTDTSCQPTLLPQHFGQEDLMSAILKQQQDG
LGPAENDFEFDGYSLDNIPV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaataacgataaaggatccatgtcaacggctagttcaagtgttactgtttcc
gatcagtttccggctggcttacgtgtccttgttgttgatgatgatcctacttgtcttagg
atcttggaaaagatgcttgggacttgtctttatgaagttacaaaatgcaatcgagcagag
attgctttggatatgcttcgaacgaacaagaatgggtacgatattgttatcagtgatgtt
catatgccagatatggatggattcaaactccttgagcaggtcgggctggagatggacctg
ccggttatcatgatgtctgcggatgatagcaaacaagttgtcatgaaaggtgttactcac
ggtgcttgtgattatttaattaagccagttcgaattgaggcactgaagaacatatggcag
catgtggttcggaagaggaagaacgagtggaaggacttggagcagtcaggaagtgtggaa
gagggagatcggcaaccaaaaccatctgaagaagcggattattcttcctcagcaaatgaa
ggaaattggagaacttcaaagaggaggaaagatgaggaagaagaaatggaagagagggat
gatacatccactttaaagaaaccgcgtgtagtttggtcagttgagctccatcaacagttt
gtgtctgccgttaaccagctaggcattgacaaggctgttcctaagaaaattctggagttg
atgaatgttcctggacttactagagaaaatgttgccagccaccttcagaaatatcgtctg
tatcttagaagactaagtggagtgtcaccacaccagggcaattcatttatcagctcccat
tcccaagaaccaccttatggttccctgtcttcgcttagtgggcttgactttcaaactctt
gctgccactggtcaaattccagctcaaagtctcgccacacttcaagcagcaggacttgca
aggtcagctgcaaagcctgggttaccaatgcctcttgttgatcaaaggaacatttttagc
tttgataatcagaagttaagatttggagaagggcaaccacaacatatgagcagtggcaaa
caaatgaacttactacatggaattccaacaaccatggattcgaaacaacttgtcaatttg
caccattctgctcaatccctcggcagcttgaacatgcaagccagtgcccatggaaaccca
agtggccagagtagccctttactcatgcaaatggctcaaccgcaatcacgagggcagata
ctaactgaaactagtggaggtcaagttcccaggcttccaacatctgttgggcatcctata
ctatcaaatggggctgctggtgcaatgttagcaagaaatgggattggtgaaaatagtaga
gggacagggtacaattcagtttctcaaacatcttcagtgttaaatttccccttaaaccac
tcggcagaattgccaggcaatagtttccccctaggaagtacaccgggaatatccgcaggg
atgtccactctcacaactaaaggtggatttcaggaagaaatcaactcagacattaaagga
tctggaggatttatgccaagttatgatatttttaatgatttgcaacagcacaaaccccac
aactgggagctgcagaatgtgggcttcgcctttgatgcttctcagcattcaaactctctg
caagccagtgttgatgtaacaccttcagttttagttaatcaaggatattcttctagccca
aggaatgtacagaatagtaatgtatcagcgatgggcaagccaattttctcggttggggaa
gggagcgagcatgggaatgctctgaatgttggtcagcatctcaatagccttcttgttgat
aactcaacaagagtgaaatctgagagagttacagatacaagctgtcagcctacactcctc
cctcaacactttggtcaggaagatcttatgagtgcaattctgaaacagcagcaggatggc
cttggaccagctgaaaatgactttgaatttgatgggtattccctggacaatattcccgtg
tag
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