Citrus x clementina (clementine): CICLE_v10004667mg
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Entry
CICLE_v10004667mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10004667mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10004667mg
Spliceosome [BR:
cic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
CICLE_v10004667mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
18031785
NCBI-ProteinID:
XP_006421203
UniProt:
V4RJZ4
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MTKKRKNNGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGD
SGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDF
EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE
INDPSLDDIRHVLNPRFTKEQVDQLDKNKLWSRALDGSDYLPGMVGLNNIKETDFVNVTI
QSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKAS
KKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTICGND
QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD
GETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI
PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELWYEMQDLHVSETLPQMV
ALSETYMQIYEQQQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaagaggaaaaataatggtagtgctgatgaagacaggcacgtgaagagtgtg
aaagtggtggagcagtcgtctccgtcacctcctcgtttgggttttgagaaccctcttttg
ccgttagctaatacatatgatgatgacgatgaggaggaggaatatggtggccgaggagat
agtggagcaaaagttggacaaaatggtcgtacgggtgaagatgatgatgaagataaggat
gaggatgaggatgacttggctaatggatatggtcaagggcagcgaagcagacttgttgaa
gtgcggagggattgcccttatcttgatactgttaatcgccaggttttggattttgatttt
gagaagttctgctctgtttctctttcaaacttaaatgtgtatgcgtgtttggtttgtggt
aagtattaccaaggaagagggcagaaatctcatgcatatactcatagcttggaagcagga
caccatgtttacatcaatcttcgaacagagaaagtttattgccttcctgatggttacgaa
attaatgacccttcactggatgatattcggcatgttctaaatccaaggtttaccaaggag
caagtagatcagcttgacaaaaataagctatggtctagggctttggatggttcggactat
cttcctggaatggtgggtctgaataacatcaaggagactgattttgtgaatgtcacaatt
caatctctaatgagagttactccattaaggaacttcttccttatccctgaaaattaccag
cactgcaaatctccacttgttcatcgttttggagaacttactaggaagatttggcatgct
cgaaattttaaaggacaggtcagcccacatgaatttctacaagcagttatgaaagccagt
aagaaacggtttcgaataggtgtacagtccaaccctgttgaattcatgtcatggcttctt
aacacactgcattcagatcttagaaatacaaagaaaaatactagcatcatatatgagtgc
tttcagggggagctggaagttgtgaaggagattcctaaaaataccatctgtggtaatgac
cagaatactgaaaaaggttcagatgggggagatgatcatgataacattactacagaaact
tctaggatgccgttcttgatgcttggtctggatttgcccccgccacctcttttcaaagat
gtgatggagaaaaatattataccccaggttccattatttaacatattgaagaagtttgat
ggggaaacagttacagaggttgtccggccacatgtggcaaggatgagataccgcgtcaca
agattaccaaaatacatgatccttcacatgcgacgctttacaaagaataacttctttgtg
gagaagaacccaacattggtcaactttccggtgaaaaatttggaattgaaggactacata
cctttgccaacaccaaaagagaatgagaaactgcgttccaagtatgatctaattgcaaac
atcgttcatgatggtaaacctgagggaggattctacagggtttttgtgcagcggaagtca
gaagaactatggtatgagatgcaggatttgcatgtttcagaaactcttcctcaaatggtc
gctctttcggagacttatatgcagatttacgagcagcagcaatag
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