Citrus x clementina (clementine): CICLE_v10004760mg
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Entry
CICLE_v10004760mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03093
RNA polymerase sigma-I factor
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10004760mg
Transcription machinery [BR:
cic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CICLE_v10004760mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
18033201
NCBI-ProteinID:
XP_006422121
UniProt:
V4SEE2
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MGVVTISSSPARSPIGLSTISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETPKR
HQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGV
VKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKTRKT
DSKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQ
LQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFAN
GPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLES
VRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQEEF
INGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGN
LNISREMVRKHEVKGLMKLKHPTRVDYLRQHMV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtcaccatctctagttcacctgctagatctccaattggattaagcacgatt
tctcaccgatctacgtcaaaaaggcctttgattgtggcattcaaagcagataaatccaat
aaccaagctttgttctcaccccaggagcagatcccactgccgatagagacacccaaacga
caccagaagagacgagaaaacagtagaaaacgtctggaaagagtgaaaggtgtcttctct
gatgaggcttctccatgtaccctggatgtggattacaatgaagcggctgccaaacttgaa
aatatatacaagcttagccctgcagttacgacctcagaagtgaaatatgctgatggtgtt
gtgaaaagaggccggcagaggagaaagaggattggtgaagttgagaaaaaatcagatgat
gttagcggtaaaccagtggttaggaaccaggttaagaggcctaagcgattgagtcttgat
aagagaattgagctgagaaagaatgaggatgagaaagtggtcaccaagactaggaaaacg
gacagtaaagatgagcatgagaaaattgagaaacttgtaagggagtattcgtattcaacg
gatttggtcagcctggattggaagaaaatgaagatacctccagttttgtcgtctacagag
catacctggttgttcaagttgatgcaacctatgaaggtatttgtgcaagtaaaggaacaa
ttgcagaaagatttggggagagaaccaactgatgttgaattagcagaggcaacaaatatg
agtgcggctcaagtgaaaaaatgcttggaagttggccgagctgcacggaacaagctcata
aagcacaatctccggcttgttttatttgtcatcaaaaaatattttcaagactttgcaaat
ggccccagatttcaagacctttgtcaggctggagtaaaaggacttatcactgcaattgat
cgttttgaaccaaaaaggagattccggctatcaacatatggacttttttggattaggcat
gctattatacgttcaatgacagtatcaagctttactcgtgttccatttggccttgaatca
gttagaggggaaatccagagagctaaacttgagttgttgtttgagcttaagagggtacca
acagatgaagagataattcaaggggtaaatatctcccctgagaggtaccgtgaagtgatg
aaggcatcgaaacccatcctttctctccattcaaggcatggggttacacaagaagagttc
atcaatgggattactgatgtcgatggtgttgaaaatgaaaaccagagacaacccgctctt
ctaaggcttgcgcttgatgatgtgcttgattctctgaagcctaaggagagcttggtgatc
agacaaagatttggactggacggtaaaggtgataggacactgggagaaattgctgggaac
ttaaatatttcaagggaaatggtccgtaaacatgaagttaagggtctgatgaaactcaag
catccaactcgagttgattatcttcgccagcacatggtatga
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