Citrus x clementina (clementine): CICLE_v10004783mg
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Entry
CICLE_v10004783mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10004783mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CICLE_v10004783mg
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
18032461
NCBI-ProteinID:
XP_006420566
UniProt:
V4SA30
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MENGESIRGPFCWSTYQTDSAEDTHTHISSLSLSLSLLLFLSSFLFFLGCVWGVGKREKI
KENNAMAVTQRGICLCFAVVLMLFVGVLASVRNEQDVSVSRKMKAESSMNSTMAAKAEVV
AEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRL
ADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQL
KQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHY
GWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLG
HSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTIN
SQGNRYNAPLNAFAKEVSTLTSHILSFVYTIRLSAMFNLLILTTGFAFTGNKEGGHSCKP
VEGLELEI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggagagtctataagagggccgttttgttggagcacgtaccagactgactct
gcagaagacactcacacacacatttcttctctctctctctctctttctctgctgcttttt
ctttcttcctttcttttttttctcggttgtgtttggggagtgggaaagagagagaaaatc
aaagaaaacaacgcaatggcggtgacgcagcgtggcatttgtctctgttttgccgtcgtt
ttgatgttgttcgtcggcgttctggcttctgtacgtaacgaacaagacgtctctgtttcc
aggaagatgaaggcagagagctcaatgaactcaacaatggcggccaaagctgaagtagta
gccgaggccttgagtaaacatgcagttgataacccagatgaaattgcttcaatggttgag
atgagcacccgcaacagcactgaaaggagaaagttggggtacttctcctgtggtactggt
aatcccattgatgactgctggcgctgtgacggcaactggcacaagaaccgcaagcgtctt
gcagattgtgggattggttttggaagaaatgccattggtggccgtgatggtcgcttctat
gttgtcactgacccaagggatgatgaccctgttaaccccaaacctggaactttacgccat
gctgttatccaggataagcctctctggattgttttcaagagggacatggtgattcaattg
aaacaggaactgattgtcaatagcttcaagaccattgatggtcgtggggcgaatgtgcac
attgctaatggaggttgcatcactatccaatttgtgaccaatgtgatcattcacggtctt
cacgttcatgactgtaaacccactggtaatgccatggttaggagctcaccgactcactat
gggtggaggacagtggctgatggtgatgccatatcaatttttggctctagccatatatgg
attgatcacaattcactctcccattgtgctgatggacttgttgatgccgtcatgggatct
actgccattaccatttcaaacaatcacatgacccaccacaatgaggttatgctgctgggt
cacagtgattcctacaccagagacaagcaaatgcaagtaaccattgcttacaaccatttt
ggagagggactcattcagagaatgccaaggtgtagacatggttatttccatgtggtgaac
aatgactacactcactgggaaatgtatgccattggtggaagtgcaaaccccaccatcaac
agccagggaaacagatacaatgctccattgaatgccttcgcaaaggaggtctcaactctc
acatctcacatattgtcttttgtctatacaataagactatctgcaatgttcaatttgctt
attctcacaactggatttgcattcacaggtaacaaagagggtggacacagctgcaagcca
gtggaagggctggaactggagatctga
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