Citrus x clementina (clementine): CICLE_v10004831mg
Help
Entry
CICLE_v10004831mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10004831mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CICLE_v10004831mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
90S particles
Helicases
CICLE_v10004831mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Trypan_PARP
AAA_22
Motif
Other DBs
NCBI-GeneID:
18033344
NCBI-ProteinID:
XP_006422284
UniProt:
V4U8C2
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MDEQILLDGNFPLFAKPKSKTRSKPEPQPEPEPESKNAKTAQLEKFTNPDPNSTTTDSTV
TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILH
RLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKSLMNRPH
VVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTL
LFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMHVLSKME
DMGIRSAIIFVSTCRSCHLLSLLLEELDQEAVALHSFKSQSQRLSALHRFKSGQATILLA
TDVASRGLDIPTVDLVLNYDIPRYPRDYVHRVGRTARAGRGGLAVSFVTQNDVDLIHEIE
AVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDGFEEKAKERKKQKLKMLAEKGS
LKKRSEKRKKSGE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacaaatcctcctcgacgggaacttccctctcttcgccaaacccaaatctaaa
accagaagcaaaccggaaccgcaacctgaacctgaaccggaatccaaaaacgctaaaacc
gctcaactcgagaaattcacaaatcccgatcctaactctaccaccaccgactccaccgtc
actttcgccggcctcggcctcgccgaatgggcggttcagacatgcaaggagcttggcatg
cggcggccgacaccggtccaaacccactgcatacccaaaattctcgagggcaaggacgtg
ctggggctggcgcagaccggtagcggcaaaaccgcagcgttcgcacttccgatactccac
cgtttggcagaggacccgtatggggtattggcactggttataacgccgacgagggagctg
gcgtaccagttggcggaacagtttaaggctctgggttcgggcttgcatttgaggtgtgag
gttgtggttggaggaatggatttgttgacccaagctaagagcttaatgaataggccgcat
gtcgttattgctacccctggaaggattaaggttttgctcgaagaggaccctgatatccct
cctgtgttttctagaactaagtttttagttttggatgaagctgatagagttttggatgtt
ggctttgaagaggaattgagagttgtttttcagtgcttgcctaaaaatcggcagactctg
ttattttctgctacaatgactagtgacttacaaaccctgctcgaactttctgcaaataaa
gcatacttttatgaggcatatgaaggcttcaagacagttgaaacacttaaacagcagtat
atctttatcccaaaaaatgtgaaggatgtttatctcatgcatgttttatctaaaatggaa
gatatgggtatccgctctgccataatatttgtctctacctgcagaagttgccacctttta
agtttattgctagaagaactggatcaggaagccgtggcactacactcatttaaatcccag
tctcagaggctttctgcacttcatcggttcaaatcaggacaagctactatattgcttgcg
actgatgttgctagccgcggtttagatattcccacagttgatcttgttctaaactatgat
attccaagatatccgagagattatgttcaccgcgtgggccgtactgcaagagcaggcaga
ggtggcttggctgttagctttgttacccaaaatgacgtagatctcattcatgaaatagaa
gccgttgttgggaaacagctagaagaatttgaatgtaaagagcaagaggttctttctgat
attacgagggtgtacaaggctagacgtgtggcgacaatgaagttgatggatgatggcttt
gaggaaaaggcaaaagaacgcaaaaagcagaaactgaaaatgttagcagaaaaaggatca
ttgaagaagcgaagtgaaaagagaaagaaatctggtgagtag
DBGET
integrated database retrieval system
