Citrus x clementina (clementine): CICLE_v10004938mg
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Entry
CICLE_v10004938mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CICLE_v10004938mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10004938mg
Enzymes [BR:
cic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CICLE_v10004938mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
CICLE_v10004938mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
18031236
NCBI-ProteinID:
XP_006419338
UniProt:
V4RFC3
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MQIVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGVHGSESDIDALCLGPEFASMAE
DFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGILIDLPYARLHVLSVPENVDVLNP
FFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLRCIKLWAKRRGVYGNLHGFLGGV
HLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPI
RLPCSPHEYCHSNITRSTFYKIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFV
RVYLSASNQDDLGDWVGWVKSRFRSLILKLEEVQGLCDPNPTEYIDVDVTEPHVVFYWGL
QPGRTNLLDIVAVEKDFLKNIHNGFQGSPGRMGLLVVQASQLSKSSQLDFGSGRRTKACW
KNLDYNLPRIPVYSQHLPNYIIGYVDAKADSKYPSAGG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagtcttggcatgggtcaagagagttgcttggcaacggcgattgccaaaagaa
cagattgcagagacacatgcaacgatattgacatatgggtcttatggccttggagttcat
ggttcagagtcagatattgatgctttatgtcttggtcctgaatttgcctcaatggcggag
gatttttttgttgttctgcacaacatgcttaagagcagacctgaagtatcagagattcac
tgtgtgaaggatgcaaaagttcctttgatgcgattcaagtttgatgggatcttgatcgac
cttccctatgcgcgtcttcacgtattatctgttcctgaaaacgtagatgtgctcaatcca
ttctttttgagggatcttgatgaaaccagttggaagagcttgtctggagtacgagcaaat
aaatgtattcttcagcttgttccagacttggagaaattccagccagtgctgagatgtatc
aaattgtgggcaaaaaggcgaggagtgtatggtaatttacatgggtttcttggaggagtt
catttggctatccttgtcgctcatgtttgccaaaatcatccaaagggcagtttgaatact
ctggttgcaaacttctttaagacatatgcctattggccttggcctacaccagtcatgctg
caggatccaatgttaccagctgctggatatccttctgagacacggtccttaatgcctatc
cgattgccgtgtagtccgcatgagtattgccattccaatattactaggagcacattctac
aaaatcagaacagagtttcttcgtggccataatacaactagggatcttatgaggccagat
tttgattggcacttcctttttgagccttttccatactcaaagaagtatgcacgatttgtc
agggtttacctttcagcttctaatcaagatgaccttggagactgggtgggttgggttaag
tcacgctttcgatctcttattctgaagttggaggaagtacaaggtctttgtgaccctaat
cctacagaatatattgatgtggatgtgacagagccgcacgttgttttctactggggcttg
caacctgggagaactaatttgctagatatagtggctgttgaaaaagatttcttgaagaat
attcataatggctttcaaggctccccaggacgaatggggttactcgtcgtgcaggcttct
cagctgtccaagagttcacagcttgattttggaagtgggaggagaactaaagcttgttgg
aaaaatctcgactacaatcttccgcgaatccctgtgtactcgcagcatctgcccaactac
atcattgggtatgtggatgctaaagcagactccaagtacccaagcgctgggggatag
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