KEGG   Citrus x clementina (clementine): CICLE_v10005464mg
Entry
CICLE_v10005464mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K08266  target of rapamycin complex subunit LST8
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    CICLE_v10005464mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10005464mg
Membrane trafficking [BR:cic04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    CICLE_v10005464mg
   mTORC2 complex
    CICLE_v10005464mg
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_HPS5 Beta-prop_IFT140_2nd Beta-prop_Nup120_160 Beta-prop_SCAP WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_DCAF12 PROPPIN Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 18032016
NCBI-ProteinID: XP_006421455
UniProt: V4S7A2
LinkDB
Position
Unknown
AA seq 309 aa
MIRQSNFGRPKAVAATVPFNTLIRFVLHLQVNRLEITPNKHYLAAAGNPHIRLFDVTSSS
PQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVL
HPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCY
VWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGF
TLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCAL
HDGAEPSAS
NT seq 930 nt   +upstreamnt  +downstreamnt
atgataagacaatcaaattttgggaggccaaaagcggtcgctgctaccgtaccattcaat
accctgattcggttcgtccttcacttacaagttaatcggctagagataactccaaataaa
cactacctggctgctgctggtaatccacatattcgcttgtttgatgttacctcaagcagc
ccgcagcctgtgatgagctatgatcagcatactaataatgttatggcagtggggtttcag
tgtgatggaaactggatgtattcaggttccgaggatggaacggtaaagatttgggattta
agggccccagtttgtcaaatggaatacgaaagtcgtgctgctgttaacactgttgtattg
cacccaaatcagactgaactgatatctggcgaccaaaatgggaatattcgtgtgtgggat
ttgacagcaaattcttgcagttgtgaactggtgccagaggtagatacagctgttaggtct
ttaacagttatgtgggacggaagcctggtagttgctgctaataaccatggaacatgttat
gtttggcgcttgatgcgtgggactcagactatgaccaactttgagccacttcataaacta
caagcacataatggatacatcctgaaatgtctcctttctccggagttttgtgaaccccac
agatatctggccactgcatcttctgaccacactgtcaagatttggaatgttgatggtttc
acattagaaaaaaccttgataggacatcaacgatgggtatgggactgtgttttctctgta
gatggtgcctatctcataacagcctcttctgatgcgacagcaagactatggtctatgtca
accggtgaagacatcagagtgtatcaaggacaccacaaagcaaccatttgttgcgctctc
catgacggagctgaaccctctgcctcttga

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