Citrus x clementina (clementine): CICLE_v10005464mg
Help
Entry
CICLE_v10005464mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
CICLE_v10005464mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10005464mg
Membrane trafficking [BR:
cic04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
CICLE_v10005464mg
mTORC2 complex
CICLE_v10005464mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_HPS5
Beta-prop_IFT140_2nd
Beta-prop_Nup120_160
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_DCAF12
PROPPIN
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_2nd
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
18032016
NCBI-ProteinID:
XP_006421455
UniProt:
V4S7A2
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MIRQSNFGRPKAVAATVPFNTLIRFVLHLQVNRLEITPNKHYLAAAGNPHIRLFDVTSSS
PQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVL
HPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCY
VWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGF
TLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCAL
HDGAEPSAS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataagacaatcaaattttgggaggccaaaagcggtcgctgctaccgtaccattcaat
accctgattcggttcgtccttcacttacaagttaatcggctagagataactccaaataaa
cactacctggctgctgctggtaatccacatattcgcttgtttgatgttacctcaagcagc
ccgcagcctgtgatgagctatgatcagcatactaataatgttatggcagtggggtttcag
tgtgatggaaactggatgtattcaggttccgaggatggaacggtaaagatttgggattta
agggccccagtttgtcaaatggaatacgaaagtcgtgctgctgttaacactgttgtattg
cacccaaatcagactgaactgatatctggcgaccaaaatgggaatattcgtgtgtgggat
ttgacagcaaattcttgcagttgtgaactggtgccagaggtagatacagctgttaggtct
ttaacagttatgtgggacggaagcctggtagttgctgctaataaccatggaacatgttat
gtttggcgcttgatgcgtgggactcagactatgaccaactttgagccacttcataaacta
caagcacataatggatacatcctgaaatgtctcctttctccggagttttgtgaaccccac
agatatctggccactgcatcttctgaccacactgtcaagatttggaatgttgatggtttc
acattagaaaaaaccttgataggacatcaacgatgggtatgggactgtgttttctctgta
gatggtgcctatctcataacagcctcttctgatgcgacagcaagactatggtctatgtca
accggtgaagacatcagagtgtatcaaggacaccacaaagcaaccatttgttgcgctctc
catgacggagctgaaccctctgcctcttga
DBGET
integrated database retrieval system