Citrus x clementina (clementine): CICLE_v10005479mg
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Entry
CICLE_v10005479mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CICLE_v10005479mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10005479mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CICLE_v10005479mg
Prokaryotic type
Archaeal type
TFB
CICLE_v10005479mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
DUF7573
Zn_ribbon_3
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
18032930
NCBI-ProteinID:
XP_006421302
UniProt:
V4S2L1
LinkDB
All DBs
Position
Unknown
AA seq
172 aa
AA seq
DB search
MTDAFCSDCKKHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGTA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgccttttgctcggactgcaagaagcacacggaggtggtgttcgaccactcg
gcgggggacacggtgtgctcggagtgcggcctcgtgttggagtcgcactccatcgacgag
acctccgagtggcgtaccttcgccaacgaatccggcgacaacgaccccgtccgtgtcggc
ggccccaccaacccgctcctggccgacggcggcctctccaccgtcatcgccaagcctaat
ggagcttccggagaattcttgtcgtcgtcgctcggacgctggcagaatcgcggctcgaat
ccggatcgcggcttgattttggcttttaaaacaattgctaccatgtctgataggttaggc
ctcgttgcaaccattaaggatcgggcaaatgagatatataagaaggtggaagatcaaaag
tctagtagaggcagaaatcaagacgcattattggctgcttgcctgtacattgcttgtcga
caagaagacaagccacgcactgttaagggtacagcctaa
DBGET
integrated database retrieval system