KEGG   Citrus x clementina (clementine): CICLE_v10005479mg
Entry
CICLE_v10005479mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K03124  transcription initiation factor TFIIB
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CICLE_v10005479mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cic03021]
    CICLE_v10005479mg
Transcription machinery [BR:cic03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     CICLE_v10005479mg
 Prokaryotic type
  Archaeal type
    TFB
     CICLE_v10005479mg
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Ribosomal_S27e DUF7573 Zn_ribbon_3 Zn_ribbon_8
Other DBs
NCBI-GeneID: 18032930
NCBI-ProteinID: XP_006421302
UniProt: V4S2L1
LinkDB
Position
Unknown
AA seq 172 aa
MTDAFCSDCKKHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGTA
NT seq 519 nt   +upstreamnt  +downstreamnt
atgacggacgccttttgctcggactgcaagaagcacacggaggtggtgttcgaccactcg
gcgggggacacggtgtgctcggagtgcggcctcgtgttggagtcgcactccatcgacgag
acctccgagtggcgtaccttcgccaacgaatccggcgacaacgaccccgtccgtgtcggc
ggccccaccaacccgctcctggccgacggcggcctctccaccgtcatcgccaagcctaat
ggagcttccggagaattcttgtcgtcgtcgctcggacgctggcagaatcgcggctcgaat
ccggatcgcggcttgattttggcttttaaaacaattgctaccatgtctgataggttaggc
ctcgttgcaaccattaaggatcgggcaaatgagatatataagaaggtggaagatcaaaag
tctagtagaggcagaaatcaagacgcattattggctgcttgcctgtacattgcttgtcga
caagaagacaagccacgcactgttaagggtacagcctaa

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