Citrus x clementina (clementine): CICLE_v10005540mg
Help
Entry
CICLE_v10005540mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CICLE_v10005540mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10005540mg
Enzymes [BR:
cic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
CICLE_v10005540mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
90S particles
Other 90S particles
CICLE_v10005540mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
DUF3332
Motif
Other DBs
NCBI-GeneID:
18033026
NCBI-ProteinID:
XP_006421662
UniProt:
V4S3M0
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MVRAFKMKGQKRKKKRDEKYDREEEEEEKEEVEEEELNDSGKRAKLEKTSQNDNKKGEED
GQEEKDVVVHEMEGIPIAPSDQNTKRLGVIFVLEKASLEVAKVGKSYQILNSDDHSNFLR
RNNKNPADYRPDIVHQALLSILDSPLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRF
AGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASI
SDDDNLVFVVGAMAHGKIDCDYTDDLIAISGYPLSAARCIARICEALEDKWNLL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggtgagggcttttaagatgaaagggcaaaagaggaagaagaagagagatgaaaaatat
gatagagaagaagaggaggaagaaaaggaagaagtagaagaagaggaattgaacgattca
ggaaagagggctaaattagagaaaacttcacaaaatgataataagaagggagaggaagat
ggacaagaagaaaaagatgtggtcgttcatgaaatggaaggtattccaattgccccaagt
gatcaaaataccaagagactaggtgttatttttgttctcgagaaagcttctcttgaagtt
gctaaagttggaaagagttaccagattttaaattctgatgatcactccaatttcttgcga
aggaataacaaaaatccagctgattacaggcctgacatcgttcatcaggctctcctatca
attttagacagcccactaaccaaggctgggaggttacaagctgtctatgttagaaccgat
aaaggtgttctttttgaagttaaaccacatgttcgtctaccgaggacatataagcgtttt
gctggtatcatgttgcagctgctgcaaaaactaagcataacagctgttggcaagcgtgag
aaattattgcgtgtgatcaagaatcctgtcacccaatatttacctgtaaactccagaaag
ataggtttctcatatagttcagaaaaattggttaagatgaggaattatgtggcttccatc
agtgatgacgacaaccttgtttttgtggttggtgcaatggcacatgggaaaatcgattgt
gattatacagatgatttaatagcaatttctggctatccactgagtgctgcccgttgcatc
gcaaggatttgcgaagctttggaggataagtggaatctgttgtaa
DBGET
integrated database retrieval system
