KEGG   Citrus x clementina (clementine): CICLE_v10005749mg
Entry
CICLE_v10005749mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03082  ATP-dependent chromatin remodeling
cic03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CICLE_v10005749mg
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CICLE_v10005749mg
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cic01009]
    CICLE_v10005749mg
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cic03021]
    CICLE_v10005749mg
   03036 Chromosome and associated proteins [BR:cic03036]
    CICLE_v10005749mg
Protein phosphatases and associated proteins [BR:cic01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     CICLE_v10005749mg
Transcription machinery [BR:cic03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     CICLE_v10005749mg
    SWI/SNF complex
     CICLE_v10005749mg
Chromosome and associated proteins [BR:cic03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    CICLE_v10005749mg
   PBAF complex
    CICLE_v10005749mg
   SWI/SNF complex
    CICLE_v10005749mg
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 18031963
NCBI-ProteinID: XP_006419192
UniProt: V4RXJ5
LinkDB
Position
Unknown
AA seq 236 aa
MKLPATSSSKAPVKFRMPTEDNLVPIRLDIETEGQRYKDAFTWNPSDPDSEVVVFAKRTV
RDLKLPPQFITQIAQSIQTQLTEFRSYEGQDMYTAEKIVPIKLDLRVNHTLIKDHFLWDL
NNYESDPEEFARTFCNDMGIEDPEVGPAVAFAIREQLYESVASAREIKISKKGRRGAEHA
ISSKGGGNALDLMKLFRYNSSVVRKRKEWYVYEPIVDILSNEEVDALEAREDRNTR
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaaacttccggcaacttcatcttcaaaagcccccgtgaagttcagaatgccaacggaa
gacaacttggtgccaattcgattggacatagagaccgaaggccagcgctataaggacgct
ttcacttggaacccttctgatcctgattcggaggttgtggtgttcgccaagagaactgtt
agagacttgaaacttccccctcagttcataactcaaattgctcaatccattcagactcag
cttactgagtttagatcatacgaaggacaagacatgtacactgctgagaaaattgtcccc
atcaagcttgatcttcgggtcaatcatactcttattaaggatcattttttgtgggacttg
aacaattatgaaagtgatcctgaagaatttgctagaacgttctgcaacgatatgggcatt
gaagacccagaagttgggcctgcagttgcctttgctatcagggaacagctttatgagagt
gtagcttcagcaagagaaatcaaaataagcaagaagggtcgacggggagccgagcatgcc
atatctagtaaaggaggtggtaatgcattggacttgatgaagttattcagatacaattct
agcgttgttaggaaaagaaaggagtggtacgtgtatgagccaattgtcgatattttatca
aatgaagaagtggatgcccttgaagcaagagaagatagaaacactcgttga

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