Citrus x clementina (clementine): CICLE_v10006456mg
Help
Entry
CICLE_v10006456mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10006456mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
90S particles
Other 90S particles
CICLE_v10006456mg
Pre-60S particles
Other pre-60S particles
CICLE_v10006456mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
DUF7386
Motif
Other DBs
NCBI-GeneID:
18031908
NCBI-ProteinID:
XP_006421360
UniProt:
V4S6V6
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MDQSNELTTETETENEKLQFKADTDICQQIMDRYATSAAPQHRHLVATAAAMRSILTSES
LPLIASAYFAAAISPLESATLDSTEVSALLTFLSIAVALVPEQGIAESKASEAVELLVGV
LERDGSLGVATVKCVVKCLGVLLVSFCDLEDWGSVKLGFETLLKFSIDKRPKVRRCAQDC
LEKVLKSFQSSTVIKAASKLINSLFEKYIPLAITLCTSGTVDGSKDEMLLKPDHLEVLYM
LNVVNLIVPRLSVKVRLKILSELCKLMTSEFSPLTRHIFKGIEAFVETSRVEVVIPEMEN
IIVSLASYVSLKKRNPVDTVMTATILLKSCMEKLLNGETRSLWTKNVPLVFGALAGLLTS
EASITLQASAFVKELISQLADVKTYEILSFEDGDPENDEARAIKSICAIFEDAIGFESIP
NEHILAVISLLFLKLGEISYIFMKRIVLKLADLLTLASVDMATANHLQHCIGSAVIAMGP
ERILTLLPISLNADDFTCSNVWLVPILKNHVIGASLGYYMEHIVPLAKTFQRASRKVKKS
ITGQDLQAHAQELWGLLPAFCRYPTDTCQNFGPLAKLLITLIKKDPSMYENIAVALQVLV
NQNRNALTSRDNLDESIINEAKDTVLGIRSVSSYTKKAATKNIRDAIGCLASITDSSITQ
TIFSSLLKRFHIINGEGEFEMLGSHIDNLTDEEHGNPSASEIRIQRSVIMELASSLVGGA
KGDLVDLIYNFIRHTLEEHAWFCSSRYEELIDLLLGVKSPLDVASLRSRFACLHILLVHT
LKMSLEEENTKAFLILNEIIVTLKDAKEGPRKAAYDVLLLISSSLRDSSCVNPDAPFYKL
VNMILGYLSGSSPHIKSGAVSALSMLVYQDPNICISKPDLVHSLLSLLKGKAAEVIKAVL
GFVKVMVSSLLAKDMQNLLVDVISEVLPWSTVSRNHFRSKVTVILEIMIRKCGFAAVQSV
TPDKYRRFLKTVLENRQNKSGPKEVGTGTETVTSDSPAKWPHRKKRKEMDALSEVNGSTE
HKKRKREKKNNYRSSKPHKATGTGGLKLGNSAGDYNHEKIMMGQLKRSGKTNRSFNEGPK
PRRKRKMDQKTKGRNDGTAVYTPASASKFNKHKKFGRK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatccaatgagctcaccacggaaacagaaaccgaaaatgaaaaactccaattc
aaagccgacacagacatctgccaacaaatcatggaccgttacgccacctccgccgctccc
cagcaccgccacctcgtcgcaaccgccgccgccatgcgctccatccttacttccgagtcc
ttgcctctgattgcctccgcctatttcgccgctgcgatttcccccttggaatccgcaacc
ctcgactctactgaggtttctgctctcttgacgtttttgtcgatcgcggtggccctggtt
ccggagcagggaattgctgaatcaaaggcaagcgaggcggtggaattattggtgggggtt
ttagagagagatgggtcgctgggagtggcgaccgttaagtgcgtggtcaagtgtttggga
gttttgttggttagtttttgtgatttggaggattggggctcggttaaattggggttcgag
accttgcttaagttctctattgataagcgtcccaaggtcagaagatgtgctcaagattgt
ttagaaaaagttctcaagtcttttcagtcttcaactgtgatcaaggccgcaagcaaactg
ataaattccttgtttgaaaagtacattcctctggcaatcacattatgtacctcaggaact
gtagatggatcaaaggatgaaatgttgttgaaacctgatcatctggaggttctctacatg
ttaaatgtagttaatcttattgttcctcggctctctgtcaaagtccgtttgaagatttta
tcagagctttgcaaacttatgacttctgagttctcaccacttacaaggcacatttttaaa
ggcattgaagcttttgttgaaacatcaagggttgaagttgttattccagagatggagaac
attatagtttctcttgcttcatatgtatctttaaaaaagaggaaccctgtggacactgtc
atgactgcaacaatattgttaaaaagctgtatggagaagcttctgaatggggaaacaaga
tcattgtggactaagaatgttcctctagtttttggtgctctagcaggtcttttgacttct
gaggctagcatcacattacaggcttcagcttttgtgaaggagttgatcagccaacttgca
gatgtaaaaacttatgaaattctatcatttgaagatggagatccagagaatgatgaagct
agagcaattaaatctatatgtgctatctttgaggatgccattggttttgagagtattcca
aacgagcatattttggccgtcatatcacttttgtttctcaaacttggagagatatcatat
atatttatgaaaagaattgtgcttaaacttgcggacttgctgactcttgctagtgtggac
atggctaccgcaaaccatcttcagcattgtattggatctgcagtaattgctatgggacca
gagaggatactcacccttttacctatctcccttaatgctgatgatttcacttgttcaaac
gtttggttggttcctatattaaaaaatcatgttattggagcatcgctagggtattatatg
gagcatattgtacctcttgcaaaaacttttcagcgggcaagtcgtaaagttaagaaatcg
ataactggtcaagatctacaggctcatgctcaggaactgtggggtttactacctgccttt
tgtcgctatcctactgatacttgccaaaattttggacctttggctaaactcttaattact
cttattaagaaggacccatccatgtatgaaaatattgctgttgccttacaggttcttgtt
aatcaaaacagaaatgctcttacctcaagagacaatcttgatgagtcaattattaacgaa
gccaaggatactgtgcttgggatcagaagtgtatcttcatatacgaaaaaagcagcgact
aaaaacattagggatgcaattggttgcttggcttctataactgattcttccataacccaa
accattttttcttcattgctaaagaggtttcatattataaatggtgaaggtgaatttgag
atgctgggaagtcatattgataatctaactgatgaagaacatggcaatccaagtgcttca
gaaatacgcatacagaggtctgtgataatggagctagcatcttctcttgttggaggagcc
aagggtgatctggtggatttaatctataacttcattaggcacactttggaggaacatgct
tggttttgttcttccagatatgaggaactgattgacttattacttggtgtgaaatctcct
ttggatgttgcttcccttagaagtcgttttgcatgtctccacattcttctggttcacaca
ttgaagatgagcttggaggaagagaatacaaaggcttttcttatcctcaatgagatcata
gtcacattaaaagatgcaaaggaaggacctaggaaagcagcctatgatgttctgctcttg
ataagctccagcttgagagactcatcatgtgtcaatcctgatgcaccgttttacaaactg
gttaatatgatcttgggttatctatctggctcatctcctcacataaagagtggagcagta
tctgcattatctatgctggtttatcaggatcctaacatttgtatctcaaagccagatctt
gttcactctcttctatctttgctaaaaggcaaagctgcagaagttataaaagctgtttta
ggttttgtgaaagtaatggtctcttccttgctagcaaaagacatgcagaatcttcttgtt
gatgtcattagtgaagttctcccatggtcaacggtctctagaaatcattttagatcaaag
gtcacagtcattctggagattatgatacggaagtgtggttttgctgcagttcaatcagtt
actccagacaaatataggagatttttgaagactgttctggagaaccgtcagaataaatca
ggtcctaaggaagttggcactggtacagagacagtgacctcagattcacctgcaaaatgg
cctcataggaagaaacgcaaggaaatggatgcattatctgaggtaaatggttcaacagaa
cataaaaagagaaagagagagaagaaaaacaattatcgctcaagcaaacctcataaagcc
acaggcactggtggtttgaaattgggaaatagtgctggggattataaccatgaaaagata
atgatgggtcaattaaaaagaagtgggaaaaccaacaggagtttcaatgaagggcccaaa
ccaaggagaaagagaaagatggaccagaaaacaaagggcagaaacgatggaacagcagtt
tatacacccgcttctgcttccaaatttaacaaacacaagaaatttgggagaaaatga
DBGET
integrated database retrieval system
