Citrus x clementina (clementine): CICLE_v10006458mg
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Entry
CICLE_v10006458mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10006458mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10006458mg
Spliceosome [BR:
cic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CICLE_v10006458mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
PRP4
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
eIF2A
Nbas_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
18033580
NCBI-ProteinID:
XP_006421197
UniProt:
V4S2B5
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MAAEEENPVSTSLPVSSAAVPDSQALISTIEVTPSQPVQPIIPPVIPPMVSAVVPPIAPI
STIPPPQVPAPLAPLPVRPPVFKPPVPAQNGEVRTSDSESDRDEPGPTRASAVEYEISEE
SRQVRERQEKAKQDLLMKRRAAVLAVPTNDMAVRARLRRLGEPITFFGEREMERRDRLRM
LMAKLDSEGQLDRLMKALEEEEAAATATGADVEEEMLQYPFYTEGSKALLDARVDIAKYS
IAKAAKRLQQAQRRRDNPDESIDEEIDYALKKVESLYLDCTESGDDRPLSGCSYSRDGNL
LATSSLSGVVKIWSMPGLQKFSALKGHTERATDVTFSPVSNHVATSSADRTARLWNTDGS
LLNTFQGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGIAFH
PDGSLAASCGLDALTRVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIW
DLRKRKSLYVIPAHSNLISQLKFEPQEGYFLVTGSYDMTVK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgaagaggaaaacccggtatcaacttcactgccagtgtcttccgctgcagtc
cctgatagtcaagcactgatatctacaattgaagtaactccatctcaaccggttcagcct
attatcccaccagttatcccacctatggtttcggcagttgtgcctcctattgctccgata
tccacaattccacctcctcaagttcctgctccattagcaccacttcctgtacgccccccg
gtgtttaagcctccagtgccagcacagaatggtgaggtcagaactagtgactctgagtct
gaccgtgatgaacctgggccaacccgggcttctgcagttgaatatgagatttcggaagag
agcagacaggtgagggagcgacaggaaaaggcaaagcaagatctgcttatgaaacggcgt
gctgctgtgctagcagtgcccactaatgatatggctgtccgtgctcgacttcgtcggctt
ggagagcccataacattttttggagaacgagagatggaaaggcgggacaggctgcggatg
cttatggcaaagctcgattctgaagggcagttagataggctgatgaaagctcttgaggag
gaggaggctgcagcaactgctactggggcagatgttgaggaagaaatgctccagtacccc
ttctatactgaggggtcaaaggctctcttggatgccagagtagatattgctaagtattct
atcgcgaaggcagcaaagcgcctacaacaagcacagaggagaagggataatcccgatgaa
tctattgatgaggaaattgattacgctcttaaaaaggtggagagtttgtacctcgattgc
acggaatctggggatgatcggccactctctggttgttcctactcacgtgatggaaacctg
cttgcaaccagctccttgagtggagttgttaagatatggagcatgccaggattgcaaaag
ttctctgccttgaagggacacacagaacgcgccactgatgttacattttcgcctgtgagc
aatcatgtggctacgtcttctgctgaccggacggcaaggttgtggaacactgatggatct
ctcctgaatacttttcaaggccatctggaccgtcttgctcgaatagccttccatccatca
gggaaatacctggggacaaccagctttgacaagacatggagactgtgggatgtagatacc
ggagtagagttgcttcttcaggaagggcatagtagaagtgtctatggaattgccttccac
cctgatggatctttggcagcttcttgcggactagatgctttgacacgtgtttgggacctc
cgtacagggagaagtattcttgccttggaaggccatgtgaagccagtacttggtatcagt
ttttcacctaatggataccatctagcaactggtggtgaggataatacttgtcgaatatgg
gacttaaggaagagaaaatctttatacgtcataccagcacactcgaatctcatatcacaa
ttgaagtttgagcctcaagaaggatacttcttagtgacagggtcgtatgacatgacagtg
aag
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