Citrus x clementina (clementine): CICLE_v10006586mg
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Entry
CICLE_v10006586mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
CICLE_v10006586mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10006586mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
CICLE_v10006586mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
OKR_DC_1_N
Motif
Other DBs
NCBI-GeneID:
18033187
NCBI-ProteinID:
XP_006421849
UniProt:
V4U759
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MAKPSFLRFNVLVVDDDSTSLAIVSAVLKHWDYDVVTVKRPVDALAMIRIHQDIDLVITD
LHMPEMNGLELQKEINEEFIHLPVMVMSSDDRESVIMKSLASGAVFYMVKPVNPDALRNV
WQYAVTSKKGKSIFIEEKKKESKTNSKRKASKRRKDELEGENAAAPKKVKVVWTNSLHNR
FLQAIRHITLEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRVAENGINAALKNFNH
RSSLASGRTSMMLQEVQDYAQAIEKQLQMRTSPFIPRYGRGISELNGNTSFGSIGLQSHN
SLSHMGLLGVQDNFHQPFFGNTTYPLYQANPGTTFGTGLIDMGTNSFSCGGLSGGLLNGS
NSNQIFRQKSKLRPDPYDNNTGASSLKGFGASGLEKMWTIKNNPYLNYAGMRLKNDGDQL
VGAGEVGLNVKGDAGAGNEGPTFHHLPPGYSSSSAGFAVGNELEHTSVLPPLSLSQQQYG
LGKKVENDFTFGLMNTVNASVNDDTARPEQLGEGADFGDLLFDLSDFQFLFQQQGDGEGA
LNPNIGSGSGSHQPELNRPINQSQNPVLPSAFADNASVIINAKILCSDSSMQKYCAQIQD
IQEVMNLDLGNSNAKPLNDYYPRLDQNPNNQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccgtcttttcttagatttaatgtcttggttgtggatgatgattcaacatct
cttgctattgtttcagctgtgcttaagcattgggattatgatgttgtgactgtcaaacgc
cccgttgatgctttagctatgattcggattcatcaagacatcgacctcgttatcactgat
ctccacatgccagagatgaatgggcttgagctgcaaaaagaaattaatgaagaatttatt
catttacctgtcatggtaatgtcctctgatgaccgagagagtgtcataatgaagagccta
gcaagtggagctgtgttttacatggtgaagccagtgaaccccgatgctctcagaaatgtg
tggcaatatgctgttacatcaaagaaagggaaatcgattttcattgaggaaaaaaaaaag
gaaagcaaaacaaattctaaaagaaaggcttcaaaaagacgcaaggatgagctagaagga
gagaatgcagctgctccgaaaaaggtcaaggtggtttggactaattcacttcacaatcgc
ttcttgcaagccattagacatatcactctggaaaaggctgttccaaagaaaatacttgag
ttcatgaatgttccaggcttaactagagaaaatgttgctagccatttgcagaagtatcgg
atcttcttgaaacgagttgccgagaacggtattaatgctgctttaaagaacttcaaccat
agatccagcttggcatcaggccgtacctcaatgatgttacaagaagtacaagattatgca
caagcaatagaaaagcagctgcaaatgagaacatcaccattcatacctagatatggacgt
ggcatctcagagctcaatggaaacaccagctttggttccattggcttgcaaagccacaac
tctctgtctcatatgggactgttgggagttcaagataattttcatcaaccattttttggc
aacactacatatcctctttatcaagcaaaccctggcaccacatttggcacaggattaatt
gacatgggaacaaattcgttctcttgcggaggtttatccggtggtcttctgaatggatca
aattcaaatcaaatattccgccaaaaatctaaattaaggccggatccctatgataataac
acaggagcttcatctctcaagggctttggcgcatcaggactcgagaaaatgtggactata
aaaaataacccatatttaaattatgctgggatgcgactaaaaaatgatggggatcagctc
gttggagcaggtgaagtggggctcaacgtcaagggggatgctggtgctggcaatgaaggt
ccgacatttcatcatttgcctccgggatactcttcatcttccgcagggtttgctgttggc
aatgaactggaacatacttcagtgctgccaccattgtcattatcacagcaacaatacggt
ctcggcaaaaaggtggaaaatgattttacttttggtctgatgaacactgttaatgcttct
gtcaatgatgacacagctcgacctgagcaattaggcgaaggtgctgattttggtgacctt
ctctttgacctatccgactttcaattcctttttcagcaacaaggcgacggggagggtgct
ctgaatcctaacattggtagtggctctggctcacatcaacctgaactcaatcgtccaatc
aaccaatcccagaatcctgtccttcccagcgcattcgctgacaatgcttctgttattatc
aatgcaaaaatattgtgctcagattcatcaatgcaaaaatattgtgctcagattcaggac
attcaagaagtaatgaacctggatttgggtaacagcaatgcgaaaccattgaatgactat
tatccaagattagatcaaaatcctaataatcag
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