Citrus x clementina (clementine): CICLE_v10006834mg
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Entry
CICLE_v10006834mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
CICLE_v10006834mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10006834mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
CICLE_v10006834mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
NDUFB11
Motif
Other DBs
NCBI-GeneID:
18032939
NCBI-ProteinID:
XP_006421850
UniProt:
V4S898
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
VTVTRPVEALATVRIQRDIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESV
IMKALASGVAFYILKPLNPDDLKNVWQYAMTYKKAKSISIDEIGSFELAGFSAGKFSLDD
IVSRSSVNERNKNNKDSKRKASKKDKGKQTKQNATAPKKPKVAWTDSLHNRFLQAIRHIG
LEKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKRVAEQGASAMGKNLALRSSFAAGHV
SMMLQEAHEFSQVRDKQQQMRTSAFLPGYGSGVSALNGTTFGSIGFPSLGASSSSSVPQL
GLMGNQANFPQLLFGNTRNPLYKANSAGTTCGSSGSNNMEANPLSRGGLAAGLMNQMYQQ
KSQSRPNPYDNDNIGASSSKGFGISGWSSSSNTSGLDQNMGTIRNNTYSNYAGIRLNDDG
ELIPAGQTSLINGSGLNGGYGLITGTSGIMANAAFGHLTPGASSSSARFDNATYQIPSAF
AGVNEQENTSMLSQLSSQQQYGHGNNAQNDFTNFAPINNASVNGKTAQPERFGEGIDLVD
LLFDPSDYQFLFQLLEIEDVSDPELSSNADPLNGYYPSFDQNANQYYTAFNKLRQHLKLI
LMVLCTRSSKAAKTLSISLS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgactgtgactcgcccggttgaagcattagctacagtccggattcaaagagacatcgac
ctcgtcgtcactgatctccacatgccggagatgaatgggattgagcttcagaaagaaatt
aatgaagaattcactcatttgcctgtcatggtaatgtcctctgatgaccgggagagtgtc
ataatgaaggccctagcaagtggagttgcgttttatatattgaaacctttgaatccggat
gatctcaaaaatgtgtggcaatatgctatgacgtacaagaaagcaaaatcgatttccata
gatgaaattgggagctttgaactagctggcttctcagctggtaaattctctcttgacgac
attgtttctagatcatctgtgaatgaaagaaacaaaaacaacaaggattctaaaaggaag
gcttcaaaaaaggacaaaggtaagcaaacaaaacagaatgcgacagctccaaaaaagccc
aaggtggcttggactgattcacttcacaatcgatttttgcaagcaattagacatattggt
ctcgagaaggctgttccgaagaaaattctggaattcatgaatgttccagggttaacgagg
gaaaatgtggctagccatttgcagaaatatcggatcttcttgaaacgggttgcggaacaa
ggtgctagcgcaatgggaaagaacttggcgctcagatccagttttgcagccggccatgtc
tctatgatgttacaagaagcacatgagttttcacaagtcagagacaagcagcagcaaatg
aggacctcagcattcctgcctggatacggaagtggtgtctcagctctcaatggtaccaca
tttggctccattggcttcccaagccttggagcttcaagcagcagctctgtgcctcagctt
ggattgatgggaaatcaagctaattttcctcaattactctttggaaacactagaaatccg
ctttataaagcaaactctgctggcacgacatgtggctcatcagggtcaaataacatggaa
gcaaatccgttgtcgcgtggaggtctggctgctggtcttatgaatcaaatgtaccagcaa
aaatcacaatcaaggccgaatccctatgataatgataacatcggagcttcctcttccaag
ggctttggcatatcgggttggagctccagtagcaacacctcaggccttgatcagaatatg
ggaactatcaggaataacacatattcaaactatgctgggattcgactaaatgatgatggg
gagctcattccagcaggtcagacgagcctcatcaatggcagtggtctgaatggtggctat
ggcttgatcactgggacttctggaattatggcgaatgcggcttttggtcatttgacgcca
ggagcgtcttcttcttctgcccgctttgataatgcaacttaccagatcccttcggcattt
gccggtgtcaatgaacaggaaaatacttccatgctgtcgcaattgtcatcacaacaacaa
tatggtcacggaaacaatgcacaaaatgatttcactaattttgctccgatcaataatgct
tctgtaaatggtaagacagctcaacctgaacgatttggcgaaggtattgaccttgttgac
cttctgtttgacccatccgactatcaattccttttccagctactggagattgaagacgtt
tcggacccagaattaagcagcaatgcggatcccctgaatggctactatccaagctttgac
caaaacgccaatcagtattatactgcttttaataaactcaggcagcatctcaaattaatc
ctaatggttttatgtacgcgtagcagcaaggcagccaaaacattatcaataagtctaagc
taa
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