Citrus x clementina (clementine): CICLE_v10006970mg
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Entry
CICLE_v10006970mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Module
cic_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10006970mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
CICLE_v10006970mg
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Paralog
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Glyco_hydro_49
Motif
Other DBs
NCBI-GeneID:
18033039
NCBI-ProteinID:
XP_006421347
UniProt:
V4S2Q2
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MDYSSCSQLLVLAILVLFTLAQNIINAAPNGVFNVIDFGAVADGIRDNSKAFENAWREAC
NWNTYSTVLVPPGKYLVTSVVFKGPCKAPISFQLQGLILAPPGLSKLADKESWITFESLR
SFTLTGGGTFHGQGRTAWPENQCHKNSNCQLPISIRFNKLNDSTITGVQSVDSKFFHINI
LGCYNLKLNKINISAPDDTTGDDCVSLGDGSQNVLVSDVSCGPGHGISVGSLGKYKKEED
VVGLTVINCTFTGTSNGVRIKTWPDSEDGKASNFTFEDLFMNNVENPIVIDQEYCPHNQC
NIKVPSRVKISNVRFRNIRGTSLTKEAVRIVCSKEIPCQNVEIGDINLVYNGIDDKGPAI
SSCSNVKPTLVGKQIPATCV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggattatagctcttgctctcagctgctagtacttgcaatcctagttttgtttactttg
gcccaaaatataatcaatgcagctcccaacggagttttcaatgtaattgactttggtgct
gtggccgatggcattagagataacagtaaggcttttgaaaatgcttggagagaagcttgc
aattggaatacctacagcacagtattggttccaccaggaaaatacttggtgacttctgtt
gtatttaaaggtccatgcaaagctccaatttcatttcaacttcaaggccttatcctggct
ccccccggtctgtcaaagctagccgataaggaaagctggatcacctttgaatccctcaga
agcttcactctcaccggtggtggaactttccatggccagggccgaactgcatggcccgaa
aatcaatgccacaaaaattcaaattgccagcttcccatttcgatacgatttaataaactg
aatgactcgacaatcactggggtgcaatctgttgatagcaagttcttccacattaacatc
ttgggttgctacaatttgaagctgaataaaattaacatctctgcacctgatgataccact
ggagatgactgtgtctctcttggtgatggcagtcaaaatgtcttggtgtctgatgtttct
tgcggaccaggacatgggatcagtgttggcagccttggaaaatataaaaaggaagaagat
gtagttggattgacagtcatcaattgcactttcacaggcacaagtaatggtgtgagaatt
aagacatggcctgattctgaggatggaaaggcttccaatttcacatttgaagaccttttc
atgaataatgtggaaaatcccattgtcattgatcaggagtattgcccacataaccaatgt
aacataaaggttccttcacgggtgaaaattagcaatgtgagatttaggaacatccgagga
acttcattaacaaaagaggctgttagaattgtttgcagcaaagagattccatgccaaaat
gttgagattggagacataaatttggtgtataatggtattgatgataagggcccggcaata
tcttcttgttcaaatgttaaaccaactcttgtcggaaaacagattccagcaacttgcgtc
taa
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