Citrus x clementina (clementine): CICLE_v10007274mg Help Entry CICLE_v10007274mg CDS       T02982                                  Name (RefSeq) hypothetical protein   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism cic  Citrus x clementina (clementine) Pathway cic03018   RNA degradation Brite KEGG Orthology (KO) [BR:cic00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CICLE_v10007274mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cic03019]     CICLE_v10007274mg    03012 Translation factors [BR:cic03012]     CICLE_v10007274mg Enzymes [BR:cic01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      CICLE_v10007274mg Messenger RNA biogenesis [BR:cic03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      CICLE_v10007274mg Translation factors [BR:cic03012]  Eukaryotic type   Initiation factors    Initiation associated factors     CICLE_v10007274mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  OB_NTP_bind HA2_C Helicase_C DEAD HA2_N dsrm AAA_22 AAA_19 AAA_16 nSTAND3 ATPase T2SSE AAA_30 NACHT PhoH ABC_tran Dicer_dimer AAA_11 Motif Other DBs NCBI-GeneID:  18053685 NCBI-ProteinID:  XP_006451691 UniProt:  V4UR24 LinkDB All DBs Position Unknown AA seq 1197 aa AA seqDB search MPFSFIFIRSGTTMTMALRPTSLNFYRAPKALLKPSPLSLLVVKNQAVAFRLLHHYHYHL PFHLSRRRHAVVTCSGAVTRTRRLDWKAVSYPLLEQQTSNYGRYAYQDESSDDSDREFGS TQQQMCGSTLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQY AKVVVFSKAPLPNYRSDLDEKRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNV GSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSY KERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAM AVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGILLRRLLVDRSLRGVTHVIV DEIHERGMNEDFLLIVLKELLPRRPELRLILMSATLNAELFSSYFGGAPMLHIPGFTYPV RAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVEDALEAADF REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAH PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCG KAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRYVYDAFADYQLPE LLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLG RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA RDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVD RNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVP KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNISRGGLDGHLKMLGGYLEFFMKP ELADTYLSLKREIEELTQQKLLNPELGIEVQNELLLAVRLLVSEDRCEGRFVFGRQIPAP SKKSAKVALPEMVSKGGMVSKGGGDNPKTDLQTVLARAGHGAPAYKTKQLKNNQFRSTVI FNGLNFVGQPCGNKKLAEKDAAAEALLWLRGDRHSSARDLDHVSMLLKRKNRSKKRT NT seq 3594 nt NT seq  +upstreamnt  +downstreamnt atgcccttctcgttcattttcattcgaagtggcacaaccatgaccatggctcttagacct acttctcttaacttctacagggcccccaaagctctactaaaaccctcgccattatcgctt ctcgttgttaaaaatcaagctgtagcttttaggttgctgcatcattatcattatcatttg ccttttcacttgagtaggcgaaggcacgcggtggtcacgtgctcgggggctgttactagg actcgtcggcttgattggaaggccgtttcgtaccctcttttggagcagcagacgtctaat tacggccggtatgcttaccaggacgagtccagcgatgactctgaccgtgaatttgggtca acacagcagcaaatgtgtggttcaacccttgataatattgatgagtggagatggaagtta accatgctgcttcgcaacaaggatgagcaagaagtggtgtcaagggcgaaaaaggaccga cgtgacttcgaacaactttcagcattggcaaccagaatgggtttacatagtcgtcaatat gcaaaagtagtcgtttttagtaaagcccctctaccgaattacagatctgatctagacgaa aagcgtccgcaaagagaggtgatcttaccatttggattattaagagaagtagatgctcat ctcaaagcttatctttcgcaaaagtatatcaatgcctccatgtcgagtttaagcaatgtt ggcagtactactaatgatgaaggactctatgagcagcaggaacagctggtgcagaatagt gttgtgagggaaagaattctccggcagagaagtttgcagatgcatgaaaagcagcaagct tggcaggaatctcctgaagggcagaagatgcttgaatttcgaagaagtctaccttcatac aaagagagggatgcattattaaaagccatttcagagaatcaggtggtggttgtctcgggt gaaactggttgcggtaaaaccacacagcttccacagtatatattagaatcggagactgaa gctgctcgtggagcagcttgcagtatcatatgtacacagcctagaagaatttctgctatg gctgtttctgaaagagttgctgcagaacgaggggagaaactgggagaatctgttggttat aaagttcggctagagggaatgaaaggaagggacacacgtcttatgttttgcaccactggc atattattgaggagattacttgttgacagaagtttgagaggtgtaactcatgttattgtt gatgagattcatgaacgtgggatgaatgaagattttcttcttattgtcctgaaagagctc cttccacgccgaccggaattgaggttgattctcatgagtgcaaccttaaatgcagaacta ttctcttcatattttggtggtgctccgatgctccatattccgggttttacataccctgtt cgagcatattttctggaaaatattctggagatgactagatatcgtttgaacacatataat caaattgatgattatggtcaagagaagtcatggaaaatgcaaaaacaagctctggctctg agaaagagaaagagctccattgcttctgctgttgaggatgcacttgaagctgctgatttt agggaatatagtgtacagactcagcagtctttatcctgttggaatccggactcaattgga tttaacctcattgagcacgtgctttgccacatagtgaagaaagagcgacctggtgctgtt ttggtttttatgaccggttgggatgacataaactctttgaaagatcagctccaagctcat cctctcttgggtgatccaagcagagtgttgttacttgcatgccatggttctatggcaagc tccgaacagaggttgatatttgataagccagaagatggagtgaggaaaattgttctagct actaacatggctgagactagtataaccatcaatgatgtggtttttgttattgattgtggg aaggcaaaagagacatcttatgatgctctaaataacactccttgtttgcttccttcctgg atctcaaaggccgccgcccgacaaagaagaggaagagctggccgtgtacagcctggcgag tgttaccatctctatcccagatatgtctatgatgcttttgctgattatcagttgccagaa cttttaaggactccactgcagtctctatgtttgcaaatcaaaagtttacaacttggaagt atctccgaattcctatctagagccctgcaaccacctgagccattatcggtcaaaaatgct attgaatatctgcagatcattggggctttagatgagaatgagaatctgacagtgctagga cgcaatttgtcaatgcttccagttgagcctaaacttggaaaaatgctcatattaggggct attttcaactgtctagatccagtaatgaccgttgttgctggtcttagtgtcagagaccca ttcttgatgccatttgacaagaaggaccttgcagagtcagcgaaagctcaattctctgcc cgtgactacagcgaccatcttgcacttgtacgtgcttatgatggttggaaagatgctgaa agacatcaatctggttatgagtattgttggaaaaattttctttctgcacaaactctgaaa gccattgattctttacgaaaacagttcctttttttgctcaaggatgctggtctggttgat cgcaatacagaaaactgcaataaatggagccatgatgagcatcttatccgagcagtcatc tgtgccggcttgtttcctggactatgctctgttgtgaataaagaaaagtccatagcattg aaaacaatggaggatggtcaggtgcttctatactcaaattctgtgaatgctggagtacct aaaattccatacccatggctagttttcaatgaaaagatcaaagtgaattcagtttttctc cgggattcaactggtgtatctgattctgtgcttctcttgtttggaggtaacatttctaga ggtggactggatggacacctcaaaatgttgggaggatacttggaatttttcatgaaaccc gaattagctgatacctatttaagcttaaagagagagattgaggaacttactcagcaaaaa cttcttaatcctgagttgggtattgaagtccagaatgaactcctactagcggtcagatta ttggtgtcagaggatcgatgtgagggcagatttgtctttggccgccagataccagcaccc tcaaagaagtcggcaaaagtggcactcccagaaatggtctcaaaaggtggaatggtctca aaaggtgggggtgataatccaaaaactgatctgcaaacagtgcttgccagagcaggacat ggtgctcctgcctacaagacaaagcaactaaaaaacaaccagtttcgttccactgtgatc tttaatggattgaactttgtggggcagccttgtggcaataaaaaacttgctgaaaaagat gcagctgcagaggcattgctgtggttgaggggcgatcgccattcatctgccagagatctt gaccatgtatcaatgctcttaaagaggaaaaatagaagtaagaaaagaacttga

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