Citrus x clementina (clementine): CICLE_v10007286mg
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Entry
CICLE_v10007286mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14486
auxin response factor
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
CICLE_v10007286mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
18055379
NCBI-ProteinID:
XP_006452860
UniProt:
V4UP50
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MKPPANGFLPSSAEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
NDFIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEAILASDMGLKQNR
QPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQEIVARDLHDTTWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVIS
SDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMF
ETEESGVRRYMGTITSISDLDPLRWKNSQWRNLQVGWDESTAGERPSRVSLWETEPVVTP
FYICPPPFFRPKFPKQPGMPDDESDIENAFKRAMPWLGDDFGMKDATSSIFPGLSLVQWM
SMQQNNQFPAAQSGFFPSMVSSTGLHSNFGTDDPSKLLNFQASALAAPNLQFSKANPQNQ
VNQLPQSPIAWTQQQQLQHLLQNPLNQQQQQHPQLHQQRQQQQQLLHPQQSQQQQQQQQN
HHHHNQQPPPPPQLQPSPTPPHSQSQSQSPVPQRPQQQPQQQQQQPQQQIFLPTHVNNGV
LVPNANQNVQQPTVYSQLQQPQLLTSNTQAPQGILSNNKNSYQLTSLPQDSQFQQQMEQS
TGPLQRQQQQSQLQQSSLQFLQQSLAQRAQQQPQVQQLAQQSMSDQQLQSQLQQKLQQQQ
QQQLLSPAGSLLQPQLLQQQLAHQQNQQLSQLPPSQNHQQQLSNNLSASVLVQPQQLPMN
QPQNQNRPLTGTRAHSNHTDGDAPSCSTSPSSNNCQISPSNFLNRNQQGPAMLMGDSVVE
PSSNLVQELHSKSDARIKHELPISKGPEHLKYKGSMTDQVEASSSGTSYCLDPGNIQQNF
SLPTYCLDGDAQSHPRNSLPFVANIDGMAPDTLLSRGYDSQKDLQNLLSNYGGTPRDIET
ELSTAAISSQSFAVPNIPFKPACSNEVGINEAGVLGNGLWANQTQRMRTFTKVQKRGSVG
RSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWDEFVS
CVQSIKILSSAEVQQMSLDGDLGNLPVPNQACSGSDSGNAWRHYDDNSAASFNR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctccagcaaatgggtttctgccaagttctgcggaaggggagaggaagaccatt
aattctgagttatggcatgcttgtgccgggccactggtttctttgcctcccgttggaagc
ctggttgtttacttccctcaaggccacagcgagcaagttgcagcatcaatgcagaaggag
aatgacttcatacccaactaccctaacctaccttccaagttgatttgcatgcttcataat
gtgacattgcatgctgatcctgaaactgatgaggtctatgctcagatgacacttcaaccc
gtaaacaaatatgaaaaggaagcaattttggcatctgatatgggccttaagcaaaacaga
caaccgactgaatttttctgcaaaactcttacagcaagcgacacaagcactcacggtgga
ttttctgttcctcgtcgggcagcagagaagatctttccgcctctagattactcgatgcaa
ccacctgctcaggagatagtcgctagagatttacatgacactacttggacattcagacat
atttatcgaggccaacccaagaggcacttgctgactacaggttggagtgtctttgttagc
actaaaagactgtttgcaggggattccgttctttttataagagatgaaaagtcacagctt
ctcctgggaataaggcgtgctaatagacagcagccagccctgtcttcatcggtcatatcc
agcgatagcatgcatataggaattcttgctgctgcagctcatgctgctgcaaataacagc
ccatttactattttctataatccaagggcgagcccttcggagtttgtgattcccttagcc
aagtataacaaagcaatgtatacccaagtttcacttggcatgcgatttagaatgatgttt
gagactgaggagtcaggagtgcgcagatacatgggtacaattaccagtatcagtgattta
gaccctttgagatggaaaaattcacagtggcgcaaccttcaggttggatgggatgaatca
actgctggagaacggcctagccgagtttcactttgggaaactgagccagttgtaactcct
ttctacatatgccctcccccttttttcagacccaagtttcccaaacaaccagggatgcca
gatgatgagtccgacatagagaatgcttttaagcgagcaatgccctggcttggagatgac
ttcggtatgaaggatgccacaagctcaatattccctggcttaagtttagttcagtggatg
agcatgcaacagaacaatcaatttccagctgctcaatcaggattctttccttccatggtt
tcttccactggcctgcatagtaactttggtactgatgatccatctaaattgctgaatttt
caagcttctgcattagctgcaccaaatctccagtttagcaaagcgaatccacaaaaccaa
gtcaaccagttgcctcagtcacctattgcgtggacccaacagcagcagctgcagcattta
ttgcagaaccctctaaaccaacagcagcagcagcaccctcaactgcatcagcagcggcag
cagcagcagcagcttctccatccgcaacagtcacagcaacagcaacagcagcagcaaaat
caccatcaccacaatcagcaaccaccaccaccaccacaactgcaaccatctccaactcca
ccccactcacaatcacagtctcaatcaccagtaccccaacgaccacagcagcagcctcaa
cagcagcaacagcagccacaacaacaaatattccttccaactcatgtaaataatggtgta
cttgtccccaacgcaaatcagaatgtgcagcagccaacagtttactctcagcttcagcag
ccacaattgctgacaagcaatacccaggccccccaaggtatcctctccaataataagaat
tcataccagttgacatccttaccacaagactcacagtttcagcaacaaatggagcaatca
actggccctttacagaggcagcagcaacagtcacaattgcaacagtcttcactgcagttc
ttgcaacaaagcctcgctcagagagcacagcagcagccacaagttcagcaattagctcag
cagagcatgtcagatcaacagcttcagtcccagttgcaacagaaattgcagcaacagcaa
cagcagcaattactctccccagctggctcacttttgcagcctcagctgctacaacaacag
ctggcccatcaacaaaaccagcaattgtctcagctgcccccatcccagaatcaccagcag
cagctcagcaacaacttgtcagcatcagtgcttgtgcaacctcaacagttgcccatgaac
cagcctcagaaccagaacagaccacttacaggaaccagagctcattctaatcatacagat
ggagatgctccatcatgttcaacctccccttcttctaataattgtcaaatatccccatca
aacttcctaaatagaaaccagcaagggccagccatgctcatgggagattcagtggttgag
ccttcaagtaatttggtccaagagcttcacagcaagtctgatgccaggatcaaacatgaa
ctgcctatctcgaaaggaccagaacatctcaagtacaaaggtagcatgaccgatcaagtg
gaagcttcctcttctggaacatcatattgccttgatcctgggaacatccagcagaatttc
tcactccctacctactgtttggatggtgatgcccagtcacatccgcggaacagccttcca
tttgttgctaatatcgatggaatggcacctgatactttgctgtcgaggggatatgactct
caaaaggatctccaaaacttgctgtctaactatggcggcactcctagagacattgagaca
gagttgtccactgctgcaataagttctcagtcatttgcagtgccaaatatacctttcaag
cctgcttgttcgaatgaggttggcattaatgaagctggggttctgggcaatggattgtgg
gccaatcaaactcagcgtatgaggacatttactaaggttcaaaagcgcgggtctgtagga
agatctattgatgttacccgttacaaaggttatgatgagctcaggcatgatctggcccgc
atgtttggaattgaagggcaactggaagatccgcaaagttctgattggaagctagtttat
gtggaccatgaaaatgacatattactcgttggtgatgatccgtgggatgagtttgtaagc
tgtgttcagagcataaagatactttcatcagctgaggtgcagcagatgagcttagatgga
gatttgggtaatctaccagttcccaatcaagcttgtagtgggtccgacagtgggaatgca
tggagacactatgatgataactcagctgcctcatttaatcgataa
DBGET
integrated database retrieval system