Citrus x clementina (clementine): CICLE_v10007295mg
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Entry
CICLE_v10007295mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10007295mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CICLE_v10007295mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_14
TPR_17
TPR_16
TPR_11
TPR_CcmH_CycH
TPR_6
TPR_7
TPR_9
TPR_10
ANAPC3
ARM_TT21_C
ARM_TT21_N
RPN7
Fis1_TPR_C
ARM_TT21_5th
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
18053771
NCBI-ProteinID:
XP_006451561
UniProt:
V4UQQ3
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR
QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD
SLELYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM
DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS
ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL
ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW
LTLLDSKTKTNVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD
TVAASVLYRLILFKHQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG
DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA
KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL
AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA
PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF
DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL
LEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR
RKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAA
AGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQLRDNTDELQDSDGELRENDHKSN
GGAALDDD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcgtgtacatacccgtgcagaattcggaggaggaggtgagagtggcactggat
cagctccctagggacgcctctgatatccttgatattctcaaagcggaacaagcccctctc
gatctctggctcatcatcgcgagggaatacttcaaacaagggaaagtagaacaatttcgt
caaattttggaggaagggtctagtcctgagattgatgaatattatgctgatgttcgatat
gagaggattgcaatattaaatgctttaggggtatactacacctaccttgggaaaattgag
acaaagcaaagagaaaaggaggaacattttattctggcaacacaatactacaacaaagca
tcaagaattgacatgcatgaaccttccacttgggttggcaaaggtcaacttttactggct
aagggtgaagtagaacaggcatcgagtgcttttaagatcgtgctagaggcagatcgtgat
aatgttcctgctctcctgggccaggcatgtgtcgagtttaatcgtggacgttattctgat
tccttggagttgtataagagggccttgcaagttcatcccagttgccctggagccataaga
cttggaattggtctctgtcgctataaattgggccaacttgggaaagctcgacaggcgttt
cagcgggctttgcagttagatccagaaaatgttgaggctcttgttgcacttgcagttatg
gatctgcaagcaaatgaagctgctggaataaggaaaggaatggagaaaatgcaaagagcc
tttgagatatacccctactgtgcaatggctctgaattatctggctaatcactttttcttc
actggtcagcatttcctagtcgagcaactgactgaaacagctcttgcagtaaccaaccat
ggaccaacaaagtcacattcttactacaatttagcacgatcttaccacagcaagggggat
tatgagaaagctgggctctactatatggcatcggtcaaagaaatcaataagccccatgaa
tttatatttccttattatggtttaggacaagtacaactgaagctgggagatttcagaagt
gcactcaccaactttgaaaaggttttggagatttaccctgataattgtgagacattgaaa
gcacttggacacatttacgttcagcttgggcagattgagaaggcccaggaacttttgagg
aaggctgcaaagattgatccacgtgatgctcaggcatttattgatttgggggaactgtta
atttcttctgacactggtgctgctcttgatgcctttaaaacagcacgtactcttttgaag
aaggcaggtgaagaagttccaatagaagttctcaacaatattggagttatacattttgaa
aagggagagtttgagtcagctcatcaaagtttcaaggatgctctaggtgatggcatatgg
cttactttgctcgacagcaaaacaaaaaccaatgttattgatgctagtgcatccatgctt
caattcaaggatatgcagttatttcatcgatttgaaaacgatggtaatcatgtggaacta
ccatggaataaggtcactgtgttatttaacctggccagattactcgagcagatacatgac
acagtagctgcaagcgtattgtaccgcttgatcttgtttaagcatcaagactacgtagat
gcttatctaaggcttgctgctattgcaaaagcgaggaacaatcttcaactgagcattgaa
ctggtcaatgaggctctgaaggtgaatggcaagtacccgaatgcattatctatgcttggt
gacttggagcttaaaaatgatgactgggtcaaggcaaaagaaacattccgagctgccagt
gatgcaactgatgggaaggattcttatgctactctctctctgggaaactggaactacttc
gccgcccttcgtaacgaaaagagagccccaaagttggaagcaacccatttggaaaaagcg
aaggaactctacacgagagttattgtccagcatacatctaatctctatgctgccaatggt
gctggagtggtcttggcagaaaaaggccagtttgatgtttcaaaagatctttttacgcag
gttcaagaagctgcaagtggaagtgtctttgtccagatgccagatgtgtggataaatttg
gcgcatgtttattttgctcaaggaaattttgctttggctatgaaaatgtatcaaaattgc
ttgagaaaattttattataatacggacgcccaaattcttctctatttggcccgaactcat
tatgaagctgaacagtggcaagactgcaagaaatcattgctgagagcgatccacttggct
ccctcaaattacacattaagatttgatgcaggtgttgctatgcagaagttttcggcatcc
acactacaaaagacaagaaggacagctgatgaggtgcgttcaacagttgcagagttagag
aatgctgttcgtgtatttagtcatttgtctgctgcttccaaccttcatcttcatgggttt
gatgagaagaaaattaacactcatgttgaatattgcaagcacttgcttgatgctgcaaaa
attcaccgcgaagcagcggagcgcgaggagcagcagaaccgtcagagacaagaagctgct
cgtcaggctgcattggctgaggaagcccgtcgtaaagctgaagaacagaagaaatatctg
ttggagaaaagaaaactggaggatgagcaaaaacggttaagacaacaggaggaacatttt
cagcgtgtaaaggagcaatggaggagtagcacacctgcatctaaacgtcgggaaaggtct
gaaaatgatgatgatgaggttggacatagtgagaagagaaggagaaaaggtggaaagagg
agaaagaaggacaagagctcaaggtcgcattatgagacggagtatgcagaagctgacatg
atggattatcgggaagaaccagaagatgaagatgctagcatgaattatagggagcccata
ggtcaaatgaatgatcaggatgacgatgtggaagaaaatgccaatgatcgtcttgcagca
gctggacttgaagattctgatgttgatgatgagatggcaccttcaataactgcagctcga
cgaaggcgagcattgtcggaatctgatgatgatgagccattcgagaggcagctgagggat
aatactgatgaactgcaggatagtgatggagaactcagagagaatgatcataaatcgaat
ggaggtgctgctttggatgatgattag
DBGET
integrated database retrieval system
