Citrus x clementina (clementine): CICLE_v10007648mg
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Entry
CICLE_v10007648mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
CICLE_v10007648mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10007648mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
CICLE_v10007648mg
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
18054074
NCBI-ProteinID:
XP_006453634
UniProt:
V4WJC4
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MTAEERMGSAGCEDGPIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL
KLLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC
DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKSLNQENSRVGAGEGGQGAMSTGNSDQNG
KSNRKRKDQDGDEDEDGDDDGQENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK
KILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFG
DLRSLNSPGRLSSSAISSSYVPGNMFGRLNSTSGLSMHGIASSGMIQPGHSQSFNTSFNT
IGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDA
TVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNF
LDHSRCNESWQDAVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATSTHLED
SRGDLSCQPGLIGNVIQNYTSKQQWLEHKQGYNQNLNNPFSNVNTLLSGNCTMGPFSQSM
DQSNSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQNHYDPMDDMMSGILKRDS
NETILMDGELGFDAYSLSSCM
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaggaaagaatgggttctgcgggttgtgaagatggacctatagacaagttt
ccaattggtatgcgagtgcttgctgttgatgacgacccaacgtgccttaaagttttggaa
aatttcctgcgtgcatgccaatatgaagttacagtaaccaatcaggctgttacagcactg
aaattgttgcgggaaaacagaaacaattttgatttggttatcagcgatgttcatatgcca
gacatggatggctttaagcttcttgaacatgtgggtcttgagatggacctacctgtcata
atgttgtcagcgtatggcgataccaagcttgtgatgaaggggattactcatggagcttgt
gactacttgttgaaacctgttcgaattgaggagctgaagaacatatggcagcatgtaatc
aggagaaagaaagttggacccaaggaccaaaacaagtcgcttaaccaagagaattctcgt
gttggagctggagaaggtggacaaggtgcaatgtctactggtaattctgatcaaaatgga
aaatccaacaggaaaaggaaggatcaagatggagatgaggatgaagatggtgatgatgat
ggacaagaaaatgaggactcaacaacccagaagaagcctcgggttgtttggaccccagag
ttgcatagaaagtttgttggagccgttaatcagttgggtgtggacaaggctgtcccgaag
aaaattcttgacctgatgaatgttgaagggcttacaagggaaaatgtggcaagtcatctg
cagaaatttaggctttacctgaaaagacttagtaatgaaacaccacaagctggcatggtt
gctgcattagggagtaaagattcctcttatttacgtatcggtgcactggatggatttggg
gatttgcgctcattgaatagtccaggaaggctttcaagttctgcaatatcatcatcatat
gtaccgggcaacatgtttggtaggttgaactctacttctggtttaagcatgcatggaatt
gcttcttctggcatgatacaaccaggccattcccaatccttcaacacctccttcaatact
attgggaagatccagcaagcaatgtttcctgcaaaccgaatttcaaatttgttccaaggt
gtcaggacgtcatcagagctcaaccagctgccgcaaagcaagtccactacccaaattgga
gattttaatcacattaatagtccaacaacgtctatggctgccactggctttacagatgcc
acagtggctgttggtagctcaagcagctctgtatctacttcctcgagcaacattatgatg
ttgcaaggaaacctgcatcaggctcacagtagggatgcttatggaaatcaatcttctctc
agtgtggcctcattgaatcaggaatcttttgatgttggagtccgtaattcttcaaacttt
ctcgatcatagtagatgtaatgaaagctggcaggatgcagttcaattgtcatcaaattca
ttgccattgagtgaaccttttattcatgatcaaatgcctcctaatttaaggaacacttta
tcttcaaccagctgtctggatatttcttcttccatggcaacttctacgcatttggaggat
tccaggggagacttgtcttgccagcctggcctgattggtaatgtaattcagaattacaca
tcgaagcagcagtggttggaacataaacagggttacaaccagaacttaaataatccattc
agcaatgtaaacactctgctttctggcaattgcactatgggtccctttagccagagcatg
gaccaaagcaattctccttacattgctcagctcactggtgtagaaaaagctccattaaat
acaaagttgaggtcaaatgatgacttcctcttggagcaaagcaagtcccatgatggtttc
attcaaaaccactatgatcccatggatgatatgatgagtggcattcttaaacgagattca
aatgaaacaattttaatggatggagagctaggatttgatgcttactccctcagctcatgc
atgtga
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