Citrus x clementina (clementine): CICLE_v10007663mg
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Entry
CICLE_v10007663mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10007663mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10007663mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
CICLE_v10007663mg
Spliceosome [BR:
cic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CICLE_v10007663mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_DEAH11
Motif
Other DBs
NCBI-GeneID:
18054393
NCBI-ProteinID:
XP_006450808
UniProt:
V4TU44
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MADEPQYSSDGTPSKRKYEDQTTPPSAAARRPTGFSAPDPAVAPTSYNSVPPPADEFQDF
QAAKRRAEQIAARLCNSVSAEAKRPRVENGSGGFDSADKGFSSPPSDLKSIPAPSAIPVS
YGGYQSMGTSKKIEIPNIRVGVIIGKSGETIKYLQLQSGAKIQVTRDTEADLNSPTRSVE
LMGTPEQIAKAEQLINDVLAEAESGGSGIVARRLTGQAGSDHFAMKIPNNKVGLVIGKGG
ETIKNMQARTGARIQVIPLHLPPGDTSTERTVQIDGTSEQIESAKQLVNEVISENRIRNP
AMAGGYSQQGYQARPPTSWGTPGAPSMQQPGYGYVQPGAYPGQTPQYNMSQPPYGGYPSQ
PTPGGYPGNWDQTPTQQTSQGSGYDYYSQQPSSQQPQAPGGSAAPADSTGYSYSQPPASG
YNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQG
DSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQ
SGYAGYGMPQAQKPLANPPAYGQTQQSPGSAGGYGQPGYSHSQPPPSSYAQPDSGSQRAP
PSNYGAATQPGYGSAAYGAPPGGSQAGYGQGPPSYYGGGYSQPVYTADGNAAPAAQPVQQ
GGVTKSPQS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaaccgcaatactcatcagacggcacacccagtaaacgcaaatacgaggac
caaacgacgcctccttcggccgctgcgcgcaggcccacgggattctctgctccggatccc
gccgttgcccctacctcctacaacagtgtccctccgcctgccgatgaattccaagacttt
caggctgccaagcgccgcgccgagcagatcgcggctcgtctctgcaactcggtttccgct
gaagccaagcgccctcgcgttgagaacggctctggcggcttcgattccgctgataaaggt
ttcagctcccctccctctgatttgaagtctattccagctccttcagccataccagtttca
tatggtggatatcagagcatgggtacaagcaaaaagattgagattccaaatattagggtt
ggtgttatcattggaaagagtggagagactatcaaataccttcaacttcaatctggggca
aagattcaggtgactcgtgacacagaggctgacctcaattctcctactcggtcggttgag
ctcatgggcacacccgaacaaattgctaaggcagagcagcttataaatgatgttcttgct
gaggctgaatcaggtggctctggtatagttgctcgaaggctaactggacaagctggctct
gaccattttgcaatgaaaattccaaacaacaaggttggtctggtaattggtaaaggaggt
gaaactataaaaaatatgcaagccaggactggagctcgtattcaggtgatacctctacat
ctgcctccaggcgacacttcgacggaaaggacggtgcagattgatgggacaagtgaacag
attgaaagtgcaaaacagttggttaatgaagtcatcagtgagaatcgtattagaaaccca
gcaatggctggaggatattcccaacaaggttatcaagcacgtcctcctacaagctggggc
acacctggggctccttcaatgcaacaacctggttatggttatgtgcagccgggagcatat
cctggtcaaacacctcagtataacatgtctcagcctccttatggtggctatccttcccaa
ccaacacctggtggatatcctggcaattgggaccagacaccaacacagcaaactagccag
ggaagtggttatgattactacagtcaacaaccatcctctcagcaaccacaagcccctggt
ggttcagcagcaccagcagatagtactggttacagttacagtcagccaccagcttctggc
tataatcagcagggccaaggttatgctcaagatagctatggtggataccatgcacctcag
tcaggctatgggcaggcagcgccatatgatcagcaacaaggctataattctgcagctggt
tatggtaatgtgaacaacacaagtcaggagggtcatactccttcttatggagctcaagga
gattcaacacaggctcctccaccagtccagtcatctgctgcgatgggccagcagggttat
ggtaccggccagcagcctagtccaaacactgccagttatccaccacaaggagctactcag
cccagttatggcgtgcctccaacttcgcagagtggctatgggagtcaggtcccaccccag
tctgggtatgctggctatgggatgcctcaagcacagaaacctcttgccaatccacctgct
tatggacagactcagcagtcacctggctctgctggtggttatggacagcctggatattcc
cattcacaaccaccaccttctagttatgcacaaccagattcgggttctcaacgtgcacca
ccatccaattatggtgctgcaactcagccaggttatggaagtgcagcatatggtgcacca
ccaggaggtagtcaggcaggttatggtcaggggccaccgtcttactatggtggtgggtat
tcacagcctgtatacactgctgatgggaatgcagcacctgctgctcagcctgttcaacag
ggtggagtaaccaagtcaccacaaagttaa
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