Citrus x clementina (clementine): CICLE_v10007871mg
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Entry
CICLE_v10007871mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K19025
AP-5 complex subunit zeta-1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
CICLE_v10007871mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10007871mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
CICLE_v10007871mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
Vps35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
18054289
NCBI-ProteinID:
XP_006452215
UniProt:
V4UMG9
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MSDRDRGWDFHLRNLSNSARDSSVATDPAADPSVLHSVKKLYELCKEEKNDDLVARVYPL
INKLFQRSVASLSQSRTSNGLLLLDILQFFLDFGEVVLHDADPSIRTFFRSCLSREFADP
VVAEATLDFINVNKKKLLSSFPTLLPQFFPLLLKLIAWNGEKLEKAFLKVFPAVMSSASF
LPLLSALVDLPILVVALEKVEKSSGSLIGSSIATIQKSTAPEMLLALMDEAYTGSTIADG
GGDSESEDSNTIDVADPLFLELLKDENDGLAERHWASPGMAATLQAAINAPPSDRLKQIL
SMTPRLLDVYFAIALRDVNDSLICALIPQLMARNATLFLDKNFSYEVRKRLLEFLLAVFQ
RSPDFIALLKKPIMDRLAEAYDSPAKMELALQLCWAIGEHGGGGASHKDAARELFENLEL
LLYENLSSSVGLRQEASVGPDSENYRKSSQSRLLCFVVTAIAKLATYHRELLPRARVSLG
KVARSRISDARVWKRARDYLGLMNDPAICLSILGPSRPSQHDIQKPGTVNWSEGGRKMVA
HFPFYILGDQKGPPFRDFTISDILPRK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgagacagaggctgggatttccatctgcgaaacttatcgaacagcgctaga
gactccagtgtcgccaccgaccccgccgccgatccttccgttctccactctgttaagaag
ttatacgaactctgtaaggaggagaaaaacgatgacctcgtggccagagtttatccgctt
attaacaagctatttcaacgatccgttgcttcgctttcgcaatctcgcacctccaatggc
cttctcttgctggatattcttcagttcttccttgattttggggaagtggttctacatgat
gctgatccaagtataaggacgtttttccgttcatgtttgagccgtgagtttgcagatcct
gttgttgcagaagcaacccttgattttataaatgtgaacaagaaaaaacttttgagttct
ttccctaccttgttgccacagttctttcctctgttgctaaagctaatagcatggaatgga
gagaaattagaaaaagcattcctgaaggtttttccagctgtgatgtcatctgcatcattt
cttcctctactttcagctctagtggatttgccaattttagttgtggccttggagaaggta
gaaaagagttcaggatcattaattggaagcagcatagctacaatccagaagagtacggcc
cctgagatgctgcttgcacttatggatgaagcctatactggttcaaccatagcagatgga
gggggagactctgaatcagaggatagtaatacaatagatgtagctgatcctctgtttctt
gaactgctgaaggatgaaaatgatggccttgctgagcgacactgggcttctcctggaatg
gctgcaacattacaagctgcaataaatgcccctccgtctgataggttgaaacagatattg
agtatgacgccccggctcctggacgtatattttgctatagcattgcgagatgtcaatgat
tccttaatctgtgcattgattccccagcttatggcaagaaatgctactctgttccttgac
aaaaacttttcttacgaggttcgtaaaaggctcttagaattcttgcttgctgtatttcag
cgatctccagattttattgcgcttttgaagaagcctataatggacagacttgcagaagcc
tatgatagccctgctaagatggagttggctctacaattgtgttgggccattggggagcac
ggcggaggtggtgcatctcacaaagatgcagctcgtgagctctttgaaaatttagaacta
cttttgtatgaaaacctttcatctagtgttggcttaaggcaggaagcatctgtgggccct
gatagtgaaaactacaggaagtcatcacagtcgaggcttttatgttttgttgttacagct
attgcaaagcttgccacatatcaccgtgaattattaccaagggcacgtgtttccttgggc
aaggtagctcgatctcggatctcagatgcaagggtatggaagcgtgctcgtgattacttg
ggtttaatgaatgaccctgcaatttgtttgtctattctggggccatcaagaccttcacaa
catgacatccagaaaccaggaactgtcaactggagtgaaggcggaagaaagatggttgca
cattttccattttacatccttggagaccaaaaaggtccacctttccgtgattttacaatt
tcagatattcttccaagaaaataa
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