KEGG   Citrus x clementina (clementine): CICLE_v10007871mg
Entry
CICLE_v10007871mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K19025  AP-5 complex subunit zeta-1
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    CICLE_v10007871mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10007871mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AP-5 complex
     CICLE_v10007871mg
SSDB
Motif
Pfam: SPG48 TPR_AP5Z1_C Vps35 Nup35_RRM_2
Other DBs
NCBI-GeneID: 18054289
NCBI-ProteinID: XP_006452215
UniProt: V4UMG9
LinkDB
Position
Unknown
AA seq 567 aa
MSDRDRGWDFHLRNLSNSARDSSVATDPAADPSVLHSVKKLYELCKEEKNDDLVARVYPL
INKLFQRSVASLSQSRTSNGLLLLDILQFFLDFGEVVLHDADPSIRTFFRSCLSREFADP
VVAEATLDFINVNKKKLLSSFPTLLPQFFPLLLKLIAWNGEKLEKAFLKVFPAVMSSASF
LPLLSALVDLPILVVALEKVEKSSGSLIGSSIATIQKSTAPEMLLALMDEAYTGSTIADG
GGDSESEDSNTIDVADPLFLELLKDENDGLAERHWASPGMAATLQAAINAPPSDRLKQIL
SMTPRLLDVYFAIALRDVNDSLICALIPQLMARNATLFLDKNFSYEVRKRLLEFLLAVFQ
RSPDFIALLKKPIMDRLAEAYDSPAKMELALQLCWAIGEHGGGGASHKDAARELFENLEL
LLYENLSSSVGLRQEASVGPDSENYRKSSQSRLLCFVVTAIAKLATYHRELLPRARVSLG
KVARSRISDARVWKRARDYLGLMNDPAICLSILGPSRPSQHDIQKPGTVNWSEGGRKMVA
HFPFYILGDQKGPPFRDFTISDILPRK
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgtccgatcgagacagaggctgggatttccatctgcgaaacttatcgaacagcgctaga
gactccagtgtcgccaccgaccccgccgccgatccttccgttctccactctgttaagaag
ttatacgaactctgtaaggaggagaaaaacgatgacctcgtggccagagtttatccgctt
attaacaagctatttcaacgatccgttgcttcgctttcgcaatctcgcacctccaatggc
cttctcttgctggatattcttcagttcttccttgattttggggaagtggttctacatgat
gctgatccaagtataaggacgtttttccgttcatgtttgagccgtgagtttgcagatcct
gttgttgcagaagcaacccttgattttataaatgtgaacaagaaaaaacttttgagttct
ttccctaccttgttgccacagttctttcctctgttgctaaagctaatagcatggaatgga
gagaaattagaaaaagcattcctgaaggtttttccagctgtgatgtcatctgcatcattt
cttcctctactttcagctctagtggatttgccaattttagttgtggccttggagaaggta
gaaaagagttcaggatcattaattggaagcagcatagctacaatccagaagagtacggcc
cctgagatgctgcttgcacttatggatgaagcctatactggttcaaccatagcagatgga
gggggagactctgaatcagaggatagtaatacaatagatgtagctgatcctctgtttctt
gaactgctgaaggatgaaaatgatggccttgctgagcgacactgggcttctcctggaatg
gctgcaacattacaagctgcaataaatgcccctccgtctgataggttgaaacagatattg
agtatgacgccccggctcctggacgtatattttgctatagcattgcgagatgtcaatgat
tccttaatctgtgcattgattccccagcttatggcaagaaatgctactctgttccttgac
aaaaacttttcttacgaggttcgtaaaaggctcttagaattcttgcttgctgtatttcag
cgatctccagattttattgcgcttttgaagaagcctataatggacagacttgcagaagcc
tatgatagccctgctaagatggagttggctctacaattgtgttgggccattggggagcac
ggcggaggtggtgcatctcacaaagatgcagctcgtgagctctttgaaaatttagaacta
cttttgtatgaaaacctttcatctagtgttggcttaaggcaggaagcatctgtgggccct
gatagtgaaaactacaggaagtcatcacagtcgaggcttttatgttttgttgttacagct
attgcaaagcttgccacatatcaccgtgaattattaccaagggcacgtgtttccttgggc
aaggtagctcgatctcggatctcagatgcaagggtatggaagcgtgctcgtgattacttg
ggtttaatgaatgaccctgcaatttgtttgtctattctggggccatcaagaccttcacaa
catgacatccagaaaccaggaactgtcaactggagtgaaggcggaagaaagatggttgca
cattttccattttacatccttggagaccaaaaaggtccacctttccgtgattttacaatt
tcagatattcttccaagaaaataa

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