Citrus x clementina (clementine): CICLE_v10007919mg
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Entry
CICLE_v10007919mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00531
Glycosaminoglycan degradation
cic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
CICLE_v10007919mg
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cic00536
]
CICLE_v10007919mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
CICLE_v10007919mg
Glycosaminoglycan binding proteins [BR:
cic00536
]
Heparan sulfate / Heparin
Enzymes
CICLE_v10007919mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
18055808
NCBI-ProteinID:
XP_006453123
UniProt:
V4U0K2
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MGSQAWLKVLLFGFCFWLSSRSSSSSSLSILQAEAAGGAGFVGGNVFIDRRSVIGRTDDD
FVCATLDWWPPEKCDYGTCSWDRASLLNLDLNSNILLNAVKAFSPLKIRLGGTLQDKVIY
DTEDNRQPCKQFVKNSSEMFGFTQGCLPMHRWDELNAFFKKSGAKIVFGLNALTGRSIQN
DGSVKGAWDYTNAESFISYTVKKNYSIHGWELGNELCGNGVGTRVAAAQYATDTISLRNV
VQKIYTGVDSKPLIIAPGGFFDAKWFKEFLDKSGQSLDVATHHIYNLGPGVDQHLVEKIL
DPSYLDGEVDTFSQLENTLKSSATSAVAWVGESGGAYNSGHNLVTNAFVFSFWYLDQLGM
AAAHDTKTYCRQSLIGGNYGLLNTTTFVPNPDYYSALLWHRLMGRNALSTSFSGTKKIRS
YAHCAKQSKGLVLLLINLDNSTTVHASVAFNGTLTSRHKHKSLKMKIIKLPQASVGGNER
EEYHLTAKDGDLHSQTMLLNGNILSVNSIGDIPTLEPLRVKSTQPVSVGPFSIVFVHMPH
VILPACS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcaggcttggttaaaggttttgctttttgggttttgtttttggttaagcagc
agaagcagcagcagcagcagcttatccattttacaggctgaagcagctggaggtgcaggt
tttgttggaggaaatgttttcattgatagaagaagtgtcattggaaggaccgatgacgat
tttgtttgtgccactttggactggtggcctcccgagaagtgtgattatgggacatgcagc
tgggacagagcctctctgctcaatctggacctcaacagcaatatattgttgaatgcggta
aaagctttctcgccattgaagattagattgggtggtactttgcaagataaggtcatatat
gatactgaagataatcggcaaccctgtaagcaattcgtcaaaaactcttcagagatgttt
ggatttactcaaggatgtttaccaatgcatagatgggatgaactgaatgccttcttcaag
aaatctggggcaaagattgtttttggattaaatgctctcaccggaaggtctatacaaaat
gatggttctgttaagggagcttgggactatactaatgctgagtcctttataagttataca
gtcaaaaagaactactcaatccatggttgggagctcggtaatgaattatgtggaaacgga
gttggaacaagagttgcagcagctcagtatgctactgatacaatctctctgagaaacgta
gtccagaaaatttatacaggcgtggactcaaagcctctgataatagcaccgggaggattc
tttgatgcaaaatggttcaaagaattcttagataaatcaggccaatctttagacgtggct
acccaccacatatacaatcttgggccaggagtcgatcagcacctggttgaaaaaattctt
gatccatcgtatcttgatggtgaggttgacacattcagtcagctcgagaataccctcaag
agttctgcaacttctgcagttgcatgggttggtgagtcaggaggggcttacaacagtggt
cataatcttgttaccaatgcgtttgtgtttagcttctggtatttggatcagctcggtatg
gcagcagctcatgatactaaaacatactgcagacagtcattaattggtggaaattatggt
ttactcaacacaaccacctttgtaccaaacccggactactacagtgctcttctttggcac
cgattaatggggagaaatgctctctcaacaagcttttctgggaccaaaaaaatacgctct
tatgcccattgtgcaaaacaatctaaagggctagtattacttctgattaacctagacaat
agcaccacagttcatgccagtgtcgccttcaatggtaccttgacttcacgacacaagcat
aaatctcttaaaatgaaaataataaagctgcctcaagcttctgtaggtggaaatgaacga
gaggaatatcatctaacagcaaaggatggagatttacatagccaaaccatgctacttaat
ggaaatattctaagtgtaaattcaatcggagatataccaacattggagcctttacgtgta
aaatcaacacagccagtatcggttggccctttctctattgtatttgttcacatgccacat
gttattctccctgcttgcagttaa
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