Citrus x clementina (clementine): CICLE_v10008090mg
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Entry
CICLE_v10008090mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03082
ATP-dependent chromatin remodeling
cic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CICLE_v10008090mg
03083 Polycomb repressive complex
CICLE_v10008090mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10008090mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CICLE_v10008090mg
Histone modification proteins
HAT complexes
HATB complex
CICLE_v10008090mg
HDAC complexes
Sin3A-HDAC complex
CICLE_v10008090mg
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CICLE_v10008090mg
PRC2.2
CICLE_v10008090mg
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CICLE_v10008090mg
Heterochromatin formation proteins
Other heterochromatin formation proteins
CICLE_v10008090mg
Chromatin remodeling factors
NuRD complex
CICLE_v10008090mg
NuRF complex
CICLE_v10008090mg
NuRF complex (fruit fly)
CICLE_v10008090mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF12
PASTA
Motif
Other DBs
NCBI-GeneID:
18054427
NCBI-ProteinID:
XP_006451472
UniProt:
V4UF91
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MDPQAPKKRGRKPKPKEDKKDEPKMKESTTTKRTAHQHAVDDKYTHWKSLVPVLYDWLAN
HNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHIS
QFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVL
GATNSRPDLDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSG
SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW
DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN
KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTHYPAGLFFQH
AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFK
AHVISCTSKP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggatccacaggcacccaagaagcgaggccgcaaaccaaaacccaaagaagacaaaaag
gacgagcccaagatgaaagaatccaccaccaccaaacgcactgctcaccagcacgctgta
gacgacaagtacactcactggaagtctctcgttcccgttctttacgactggctcgctaac
cacaatctcgtttggccctctctctcttgccgatggggtccacagcttgagcaagctact
tataagaatcgccaacgtctctacctttctgaacaaactgatggcagcgttccaaataca
ctggtgattgcgaattgtgaggttgtcaaaccaagagtcgctgctgccgagcacatttct
cagtttaatgaagaggcgcgatctccgtttgtcaagaagcacaagaccattatacatcct
ggagaggtcaacagaatcagggaacttccacagaatactaagatagtggccacacacaca
gatagtcctgatgttctcatttgggatgttgaagctcaacctaaccgtcatgctgttctt
ggagccaccaattctcgtccagatttggataatgctgaattcgctcttgcaatgtgccca
acagaaccctatgtgctttctggaggtaaggacaagtcagtggttttgtggagcatccaa
gaccatataacttcatcggccactgatccagcaaccgctaaatctgctggatcaagtgga
tcaatcattaaacaaagccccaagcctggggatggtaacgacaaagctgctgatggccct
tctgttggtccacggggtatctacaatgggcatgaggatacagttgaagatgtgacattc
tgtccatccagtgcgcaggagttctgtagcgttggtgatgactcatgccttatattatgg
gatgcccgagttggcactagcccagtcattaaggttgaaaaagcacatgatgctgatctt
cactgtgttgactggaatccccttgatgataatcttatccttaccgggtcagctgataac
tctgtccgcatgtttgatcggcgtaatctcacttctaacggagttggatcgcctatcaat
aaatttgaaggtcacagtgccgctgttctctgtgttcagtggtctccagacaagtcgtct
gtatttggaagctctgcagaggatggtctcttaaacatttgggactatgagaaggttggt
aaaaaggtggagcaggggccaagaaccactcattatcctgcaggcttgtttttccagcat
gctgggcacagggacaaagttgttgacttccactggaatgcatctgatccatggactgtt
gttagtgtctctgatgactgcgattctactggtggaggaggaacactgcagatatggcgc
atgagtgatttgatctatcggccgcaagatgaggttttagcagagcttgagaagttcaag
gcccacgtaatttcatgtacttcaaagccttga
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integrated database retrieval system
